Anchorpoints

Gene id
CS00018G01340
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G21610No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G22000RING-H2 group F2A RING-H2 group F2A (RHF2A); FUNCTIONS IN: zinc ion binding; INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1); Has 8047 Blast hits to 5903 proteins in 316 species: Archae - 0; Bacteria - 141; Metazoa - 1863; Fungi - 401; Plants - 2610; Viruses - 42; Other Eukaryotes - 2990 (source: NCBI BLink). encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00004G01680No description available.scaffold00004+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G09390No description available.A03+View
BR02G10800No description available.A02+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G04250No description available.Bvchr7.sca021-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G16090No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G05030No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00222G00240No description available.supercontig_222+View
CP00103G00460No description available.supercontig_103+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G15760No description available.scaffold_11+View
EG0010G05180No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G28460E3 ubiquitin-protein ligase At3g02290 (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G38930No description available.Gm19-View
GM13G38720No description available.Gm13+View
GM12G31700No description available.Gm12-View
GM03G36270No description available.Gm03-View
GM02G34840No description available.Gm02+View
GM10G10560No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G12670No description available.Chr01+View
GR06G14740No description available.Chr06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD14G004160No description available.14-View
MD11G013520No description available.11-View
MD12G003910No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02892G01050No description available.scaffold02892-View
ME08542G00600No description available.scaffold08542+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G106770E3 ubiquitin-protein ligase RHF2A-like proteinchr7-View
MT2G087820E3 ubiquitin-protein ligase RHF2A-like proteinchr2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G57500zinc finger, C3HC4 type domain containing protein, expressed3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G15130No description available.scaffold_6-View
PPE_007G11250No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G21380No description available.Chr01+View
PT06G20020No description available.Chr06+View
PT16G06640No description available.Chr16+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29333G00430No description available.29333-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G006810RING-H2 zinc finger protein (Fragment) (AHRD V1 *-*- A1IW10_9LAMI)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech01+View
SL10G081710RING finger protein 43 (AHRD V1 *-*- RNF43_HUMAN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech10+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G030260Zinc finger RING-type (AHRD V1 **-- Q2HT04_MEDTR)chr06-View
ST01G007370RING-H2 zinc finger protein (AHRD V1 *--* Q0WT62_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr01+View
ST10G026400Zinc/RING finger protein 3 (AHRD V1 *--* E5RZE1_TRISP); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G26370No description available.scaffold_9-View
TC0005G10770No description available.scaffold_5-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G23190similar to AT5G22000|RHF2A (RING-H2 GROUP F2A)ch6-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G01260name=GSVIVG01022547001;chr8-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G32520No description available.4-View


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Gene id
Species
Description
Chromosome
Strand