Anchorpoints

Gene id
CS00007G01900
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G24700No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18130member of Histidine Kinase phytochrome E (PHYE); FUNCTIONS IN: protein histidine kinase activity, G-protein coupled photoreceptor activity, signal transducer activity; INVOLVED IN: in 8 processes; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phytochrome, central region (InterPro:IPR013515), Signal transduction histidine kinase, core (InterPro:IPR005467), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Phytochrome chromophore attachment domain (InterPro:IPR016132), ATPase-like, ATP-binding domain (InterPro:IPR003594), PAS fold-2 (InterPro:IPR013654), Phytochrome A/B/C/D/E (InterPro:IPR012129), Phytochrome (InterPro:IPR001294), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), Phytochrome chromophore binding site (InterPro:IPR013516), GAF (InterPro:IPR003018); BEST Arabidopsis thaliana protein match is: phytochrome B (TAIR:AT2G18790.1); Has 25391 Blast hits to 25044 proteins in 3724 species: Archae - 289; Bacteria - 19481; Metazoa - 8; Fungi - 476; Plants - 4006; Viruses - 9; Other Eukaryotes - 1122 (source: NCBI BLink). phytochrome E4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G09310No description available.A01-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G06930No description available.Chr3+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G08280No description available.CM3.5_scaffold00001-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_007G22140No description available.scaffold_7+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G02650No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G08690Phytochrome E (putative)LG3-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G04090No description available.Chr11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G006510No description available.5-View
MD10G021310No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06582G00330No description available.scaffold06582+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G07040No description available.scaffold_4-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29693G01130No description available.29693+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G071260Phytochrome Ech02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G017600Phytochrome E (AHRD V1 ***- Q9M6P6_SOLLC); contains Interpro domain(s) IPR012129 Phytochrome A/B/C/D/Echr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G15490No description available.scaffold_6+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G15980similar to AT4G18130|PHYE (PHYTOCHROME DEFECTIVE E)ch7-4+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G03430name=GSVIVG01021381001;chr10-View


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Gene id
Species
Description
Chromosome
Strand