Anchorpoints

Gene id
CS00002G06180
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G25010No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G76130alpha-amylase-like 2 (AMY2); FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding; INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process; LOCATED IN: extracellular region; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046), Alpha-amylase, plant (InterPro:IPR013775), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Glycosyl hydrolase, family 13, catalytic domain (InterPro:IPR006047), Alpha-amylase, C-terminal beta-sheet (InterPro:IPR012850); BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1); Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39; Bacteria - 1348; Metazoa - 171; Fungi - 337; Plants - 494; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink). alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis. alpha-amylase-like 21+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00001G01750No description available.scaffold00001-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G31340No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G01490No description available.Bvchr9.sca025-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G03830No description available.CM3.5_scaffold00029+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02430No description available.supercontig_26-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G21720No description available.scaffold_2+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G30060No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G37730Alpha-amylase, Precursor (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G39930No description available.Gm14-View
GM10G11053No description available.Gm10+View
GM17G38100No description available.Gm17+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G26840No description available.Chr09-View
GR10G00100No description available.Chr10-View
GR05G13920No description available.Chr05+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD08G000510No description available.8-View
MD00G132570No description available.MDC005660.433+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09683G00090No description available.scaffold09683+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G026170alpha amylase domain proteinchr1+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G36640No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G01430No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G06290No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G082090Alpha-amylase (AHRD V1 ***- D1MEA8_SOLTU)%3B contains Interpro domain(s) IPR013775 Alpha-amylase%2C plantch04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G035480Alpha-amylase (AHRD V1 ***- Q41442_SOLTU); contains Interpro domain(s) IPR013775 Alpha-amylase, plantchr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G05210No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G31260similar to AT1G76130|AMY2 (ALPHA-AMYLASE-LIKE 2)ch5-7+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G00890name=GSVIVG01008714001;chr18-View


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Gene id
Species
Description
Chromosome
Strand