Anchorpoints

Gene id
CS00002G05990
Organism
Citrus sinensis

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G37730No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G40250RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). RING/U-box superfamily protein5+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00044G00850No description available.scaffold00044-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G09620No description available.A04+View
BR08G24970No description available.A08-View
BR02G23760No description available.A02+View
BR05G24710No description available.A05+View
BR06G38670No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G03830No description available.Bvchr9.sca025+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G19310No description available.Chr9+View
CL11G12840No description available.Chr11+View
CL11G08550No description available.Chr11+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00040G02400No description available.CM3.5_scaffold00040+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02750No description available.supercontig_26-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G06960No description available.scaffold_8-View
CRU_007G34090No description available.scaffold_7-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G31700No description available.scaffold_6+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G38020RING-H2 finger protein ATL5J (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G02390No description available.Gm06-View
GM14G40110No description available.Gm14-View
GM11G36040No description available.Gm11-View
GM04G02340No description available.Gm04-View
GM13G30600No description available.Gm13+View
GM17G38020No description available.Gm17+View
GM10G10280No description available.Gm10+View
GM13G23930No description available.Gm13+View
GM17G07580No description available.Gm17-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G00150No description available.Chr10-View
GR11G20940No description available.Chr11+View
GR09G19190No description available.Chr09-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G002720No description available.chr5-View
LJ1G044090No description available.chr1-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G000620No description available.6-View
MD12G014450No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07012G00140No description available.scaffold07012-View
ME02943G00550No description available.scaffold02943+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G055030zinc finger C C3HC4 type (RING finger) proteinchr6-View
MT3G114500zinc finger C C3HC4 type (RING finger) proteinchr3+View
MT5G071930zinc finger C C3HC4 type (RING finger) proteinchr5+View
MT1G026070anaphase-promoting complex subunit 11 RING-H2 finger proteinchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G53500RING-H2 finger protein ATL2M, putative, expressed1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G20630No description available.scaffold_7+View
PPE_004G28160No description available.scaffold_4+View
PPE_001G36860No description available.scaffold_1-View
PPE_005G00730No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G09900No description available.Chr05-View
PT05G24450No description available.Chr05+View
PT02G01740No description available.Chr02-View
PT07G06440No description available.Chr07+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G06000No description available.30170+View
RC30074G00080No description available.30074+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G082690Ring finger protein (AHRD V1 *-*- O49869_HORVU)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View
SL04G081890Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G027610E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 **** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12-View
ST03G025830E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *-** ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr03-View
ST04G025840E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *--* ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04-View
ST04G035280E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View
ST04G036170Ring finger protein (AHRD V1 *-*- O49869_HORVU); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G04830No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G01700similar to AT5G40250|zinc finger (C3HC4-type RING finger) family proteinch7-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G01210name=GSVIVG01008754001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G24390No description available.4+View


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Gene id
Species
Description
Chromosome
Strand