Anchorpoints
- Gene id
- CS00002G05990
- Organism
- Citrus sinensis
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G37730 | No description available. | scaffold_7 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G40250 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1); Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0; Bacteria - 0; Metazoa - 2235; Fungi - 712; Plants - 5071; Viruses - 76; Other Eukaryotes - 1332 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00044G00850 | No description available. | scaffold00044 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G09620 | No description available. | A04 | + | View |
BR08G24970 | No description available. | A08 | - | View |
BR02G23760 | No description available. | A02 | + | View |
BR05G24710 | No description available. | A05 | + | View |
BR06G38670 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV9G03830 | No description available. | Bvchr9.sca025 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL09G19310 | No description available. | Chr9 | + | View |
CL11G12840 | No description available. | Chr11 | + | View |
CL11G08550 | No description available. | Chr11 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00040G02400 | No description available. | CM3.5_scaffold00040 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00026G02750 | No description available. | supercontig_26 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G06960 | No description available. | scaffold_8 | - | View |
CRU_007G34090 | No description available. | scaffold_7 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0006G31700 | No description available. | scaffold_6 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G38020 | RING-H2 finger protein ATL5J (similar to) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM06G02390 | No description available. | Gm06 | - | View |
GM14G40110 | No description available. | Gm14 | - | View |
GM11G36040 | No description available. | Gm11 | - | View |
GM04G02340 | No description available. | Gm04 | - | View |
GM13G30600 | No description available. | Gm13 | + | View |
GM17G38020 | No description available. | Gm17 | + | View |
GM10G10280 | No description available. | Gm10 | + | View |
GM13G23930 | No description available. | Gm13 | + | View |
GM17G07580 | No description available. | Gm17 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G00150 | No description available. | Chr10 | - | View |
GR11G20940 | No description available. | Chr11 | + | View |
GR09G19190 | No description available. | Chr09 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G002720 | No description available. | chr5 | - | View |
LJ1G044090 | No description available. | chr1 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G000620 | No description available. | 6 | - | View |
MD12G014450 | No description available. | 12 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07012G00140 | No description available. | scaffold07012 | - | View |
ME02943G00550 | No description available. | scaffold02943 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT6G055030 | zinc finger C C3HC4 type (RING finger) protein | chr6 | - | View |
MT3G114500 | zinc finger C C3HC4 type (RING finger) protein | chr3 | + | View |
MT5G071930 | zinc finger C C3HC4 type (RING finger) protein | chr5 | + | View |
MT1G026070 | anaphase-promoting complex subunit 11 RING-H2 finger protein | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G53500 | RING-H2 finger protein ATL2M, putative, expressed | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_007G20630 | No description available. | scaffold_7 | + | View |
PPE_004G28160 | No description available. | scaffold_4 | + | View |
PPE_001G36860 | No description available. | scaffold_1 | - | View |
PPE_005G00730 | No description available. | scaffold_5 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G09900 | No description available. | Chr05 | - | View |
PT05G24450 | No description available. | Chr05 | + | View |
PT02G01740 | No description available. | Chr02 | - | View |
PT07G06440 | No description available. | Chr07 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G06000 | No description available. | 30170 | + | View |
RC30074G00080 | No description available. | 30074 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G082690 | Ring finger protein (AHRD V1 *-*- O49869_HORVU)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch04 | + | View |
SL04G081890 | Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch04 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST12G027610 | E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 **** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr12 | - | View |
ST03G025830 | E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *-** ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr03 | - | View |
ST04G025840 | E3 ubiquitin-protein ligase Os03g0188200 (AHRD V1 *--* ATL31_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr04 | - | View |
ST04G035280 | E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr04 | + | View |
ST04G036170 | Ring finger protein (AHRD V1 *-*- O49869_HORVU); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type | chr04 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G04830 | No description available. | scaffold_8 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G01700 | similar to AT5G40250|zinc finger (C3HC4-type RING finger) family protein | ch7-1 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G01210 | name=GSVIVG01008754001; | chr18 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM04G24390 | No description available. | 4 | + | View |