Anchorpoints

Gene id
CRU_007G36040
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G39990No description available.scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G38530tryptophan synthase beta type 2 (TSBtype2); FUNCTIONS IN: pyridoxal phosphate binding, tryptophan synthase activity, catalytic activity; INVOLVED IN: tryptophan biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain-like (InterPro:IPR006316); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). tryptophan synthase beta type 2 TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels.5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G00280No description available.A02+View
BR04G08330No description available.A04+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G06540No description available.Bvchr2.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G13620No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00051G01180No description available.CM3.5_scaffold00051-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G01260No description available.scaffold04043+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G22220No description available.scaffold_3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G10960No description available.Chr17+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G03530similar to AT5G38530|tryptophan synthase-relatedch7-1-View


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Gene id
Species
Description
Chromosome
Strand