Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CRU_007G34310
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CRU_005G06470 | No description available. | scaffold_5 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G37950 | No description available. | scaffold_7 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G28500 | 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosol, cytosolic ribosome, ribosome, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT5G40040.1); Has 1217 Blast hits to 1216 proteins in 338 species: Archae - 72; Bacteria - 1; Metazoa - 371; Fungi - 279; Plants - 263; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). 60S acidic ribosomal protein family | 3 | + | View |
| AT5G40040 | 60S acidic ribosomal protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation; LOCATED IN: cytosolic ribosome, ribosome; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813); BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT3G28500.1); Has 1312 Blast hits to 1311 proteins in 335 species: Archae - 56; Bacteria - 1; Metazoa - 381; Fungi - 288; Plants - 339; Viruses - 0; Other Eukaryotes - 247 (source: NCBI BLink). 60S acidic ribosomal protein family | 5 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR02G32110 | No description available. | A02 | - | View |
| BR06G32250 | No description available. | A06 | - | View |
| BR09G02660 | No description available. | A09 | + | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP2G17260 | similar to AT3G28500|60S acidic ribosomal protein P2 (RPP2C) | ch2-4 | + | View |
| TP7G02060 | similar to AT5G40040|60S acidic ribosomal protein P2 (RPP2E) | ch7-1 | - | View |