Anchorpoints

Gene id
CRU_007G28020
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL0G02950No description available.scaffold_9+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G13350NSP (nuclear shuttle protein)-interacting GTPase (NIG); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: nucleocytoplasmic transport, response to virus; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: flower, root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ArfGap/RecO-like zinc finger domain-containing protein (TAIR:AT4G32630.1); Has 7463 Blast hits to 6530 proteins in 396 species: Archae - 2; Bacteria - 285; Metazoa - 3343; Fungi - 1586; Plants - 848; Viruses - 60; Other Eukaryotes - 1339 (source: NCBI BLink). NSP (nuclear shuttle protein)-interacting GTPase Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection.4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G06440No description available.A08-View
BR04G07150No description available.A04+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00023G01080No description available.supercontig_23-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G08800No description available.scaffold_3-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G00680Probable ADP-ribosylation factor GTPase-activating protein AGD14 (ARF GAP AGD14) (similar to)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G04420No description available.Gm08-View
GM09G32050No description available.Gm09+View
GM05G35310No description available.Gm05+View
GM07G09751No description available.Gm07-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G06910No description available.Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29848G02530No description available.29848+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G10920similar to AT4G13350|NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE)ch7-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G05470name=GSVIVG01015419001;chr11-View


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Gene id
Species
Description
Chromosome
Strand