Anchorpoints
- Gene id
- CRU_007G11210
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_003G33280 | No description available. | scaffold_3 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G13010 | No description available. | scaffold_7 | + | View |
AL3G35730 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G28750 | PSA E1 KNOCKOUT (PSAE-1); FUNCTIONS IN: catalytic activity; INVOLVED IN: response to salt stress; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: photosystem I subunit E-2 (TAIR:AT2G20260.1); Has 449 Blast hits to 449 proteins in 133 species: Archae - 0; Bacteria - 180; Metazoa - 5; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I Photosystem I reaction centre subunit IV / PsaE protein | 4 | - | View |
AT2G20260 | photosystem I subunit E-2 photosystem I subunit E-2 (PSAE-2); FUNCTIONS IN: catalytic activity; INVOLVED IN: photosynthesis; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, photosystem I reaction center; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit IV/PsaE (InterPro:IPR003375), Electron transport accessory protein (InterPro:IPR008990); BEST Arabidopsis thaliana protein match is: Photosystem I reaction centre subunit IV / PsaE protein (TAIR:AT4G28750.1); Has 441 Blast hits to 441 proteins in 130 species: Archae - 0; Bacteria - 177; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 3; Other Eukaryotes - 171 (source: NCBI BLink). Encodes subunit E of photosystem I. | 2 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G08390 | No description available. | A01 | + | View |
BR08G16550 | No description available. | A08 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G00650 | No description available. | Bvchr7.sca014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00008G02040 | No description available. | supercontig_8 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00029G00110 | No description available. | scaffold00029 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G07100 | No description available. | scaffold_8 | + | View |
EG0002G17050 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV2G10790 | Photosystem I reaction center subunit IV B isoform 2, Precursor (similar to) | LG2 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G19170 | No description available. | Gm13 | - | View |
GM10G04780 | No description available. | Gm10 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G15150 | No description available. | Chr07 | - | View |
GR04G05780 | No description available. | Chr04 | - | View |
GR01G23580 | No description available. | Chr01 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD05G014740 | No description available. | 5 | - | View |
MD10G013120 | No description available. | 10 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11378G00180 | No description available. | scaffold11378 | + | View |
ME06825G00410 | No description available. | scaffold06825 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G069235 | photosystem I reaction center subunit IV A | chr1 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_008G22450 | No description available. | scaffold_8 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G25380 | No description available. | Chr02 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30204G00950 | No description available. | 30204 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G083680 | Photosystem I reaction center subunit IV A (AHRD V1 ***- B6TH55_MAIZE)%3B contains Interpro domain(s) IPR008990 Electron transport accessory protein | ch06 | + | View |
SL09G063130 | Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE)%3B contains Interpro domain(s) IPR003375 Photosystem I reaction centre subunit IV/PsaE | ch09 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G018400 | Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE); contains Interpro domain(s) IPR003375 Photosystem I reaction centre subunit IV/PsaE | chr09 | - | View |
ST06G034140 | Photosystem I reaction center subunit IV A (AHRD V1 *-*- B6TH55_MAIZE); contains Interpro domain(s) IPR008990 Electron transport accessory protein | chr06 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0001G24290 | No description available. | scaffold_1 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP3G33490 | similar to AT2G20260|PSAE-2 (photosystem I subunit E-2) | ch3-6 | + | View |
TP7G26760 | similar to AT4G28750|PSAE-1 (PSA E1 KNOCKOUT) | ch7-5 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G12090 | name=GSVIVG01028481001; | chr7 | - | View |