Anchorpoints
- Gene id
- CRU_007G09630
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G17860 | No description available. | scaffold_8 | - | View |
CRU_004G02920 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G11140 | No description available. | scaffold_7 | + | View |
AL4G03580 | No description available. | scaffold_4 | - | View |
AL8G23550 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G30430 | tetraspanin9 (TET9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 465 Blast hits to 462 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). tetraspanin9 Member of TETRASPANIN family | 4 | - | View |
AT5G57810 | tetraspanin15 Member of TETRASPANIN family tetraspanin15 (TET15); INVOLVED IN: aging; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin14 (TAIR:AT2G01960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 5 | - | View |
AT2G23810 | tetraspanin8 Member of TETRASPANIN family tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | 2 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00019G01160 | No description available. | scaffold00019 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G07030 | No description available. | A01 | + | View |
BR10G10930 | No description available. | A10 | - | View |
BR02G13240 | No description available. | A02 | + | View |
BR09G43550 | No description available. | A09 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV8G15790 | No description available. | Bvchr8.sca017 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G06840 | No description available. | Chr11 | - | View |
CL06G13360 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00012G01940 | No description available. | CM3.5_scaffold00012 | - | View |
CM00003G02190 | No description available. | CM3.5_scaffold00003 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00048G00530 | No description available. | scaffold00048 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G10160 | No description available. | scaffold_3 | + | View |
EG0003G01790 | No description available. | scaffold_3 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM17G07700 | No description available. | Gm17 | - | View |
GM13G01580 | No description available. | Gm13 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G00800 | No description available. | Chr09 | - | View |
GR04G27330 | No description available. | Chr04 | - | View |
GR04G10430 | No description available. | Chr04 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ6G012430 | No description available. | chr6 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G129670 | tetraspanin family protein | chr4 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G09240 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT18G09980 | No description available. | Chr18 | - | View |
PT06G17790 | No description available. | Chr06 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G006280 | Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroup | ch07 | + | View |
SL12G010570 | Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroup | ch12 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST07G005630 | Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV); contains Interpro domain(s) IPR000301 Tetraspanin, subgroup | chr07 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G15280 | No description available. | scaffold_9 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP7G28310 | similar to AT4G30430|TET9 (TETRASPANIN9) | ch7-5 | - | View |
TP6G19490 | similar to AT5G57810|TET15 (TETRASPANIN15) | ch6-6 | - | View |
TP4G02750 | similar to AT2G23810|TET8 (TETRASPANIN8) | ch4-2 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV11G07980 | name=GSVIVG01023726001; | chr11 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G14690 | senescence-associated protein DH | 7 | + | View |