Anchorpoints

Gene id
CRU_007G09630
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_008G17860No description available.scaffold_8-View
CRU_004G02920No description available.scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G11140No description available.scaffold_7+View
AL4G03580No description available.scaffold_4-View
AL8G23550No description available.scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G30430tetraspanin9 (TET9); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin8 (TAIR:AT2G23810.1); Has 465 Blast hits to 462 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). tetraspanin9 Member of TETRASPANIN family4-View
AT5G57810tetraspanin15 Member of TETRASPANIN family tetraspanin15 (TET15); INVOLVED IN: aging; LOCATED IN: integral to membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana protein match is: tetraspanin14 (TAIR:AT2G01960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5-View
AT2G23810tetraspanin8 Member of TETRASPANIN family tetraspanin8 (TET8); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, conserved site (InterPro:IPR018503), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin9 (TAIR:AT4G30430.1); Has 603 Blast hits to 600 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 159; Fungi - 0; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00019G01160No description available.scaffold00019+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G07030No description available.A01+View
BR10G10930No description available.A10-View
BR02G13240No description available.A02+View
BR09G43550No description available.A09+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G15790No description available.Bvchr8.sca017+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G06840No description available.Chr11-View
CL06G13360No description available.Chr6-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00012G01940No description available.CM3.5_scaffold00012-View
CM00003G02190No description available.CM3.5_scaffold00003-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00048G00530No description available.scaffold00048-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G10160No description available.scaffold_3+View
EG0003G01790No description available.scaffold_3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM17G07700No description available.Gm17-View
GM13G01580No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G00800No description available.Chr09-View
GR04G27330No description available.Chr04-View
GR04G10430No description available.Chr04-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ6G012430No description available.chr6+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G129670tetraspanin family proteinchr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G09240No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G09980No description available.Chr18-View
PT06G17790No description available.Chr06-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G006280Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroupch07+View
SL12G010570Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroupch12+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G005630Senescence-associated protein (AHRD V1 ***- B3TLS7_ELAGV); contains Interpro domain(s) IPR000301 Tetraspanin, subgroupchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G15280No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G28310similar to AT4G30430|TET9 (TETRASPANIN9)ch7-5-View
TP6G19490similar to AT5G57810|TET15 (TETRASPANIN15)ch6-6-View
TP4G02750similar to AT2G23810|TET8 (TETRASPANIN8)ch4-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G07980name=GSVIVG01023726001;chr11+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G14690senescence-associated protein DH7+View


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Gene id
Species
Description
Chromosome
Strand