Anchorpoints

Gene id
CRU_007G05650
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G06620No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G343504-hydroxy-3-methylbut-2-enyl diphosphate reductase (HDR); FUNCTIONS IN: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity; INVOLVED IN: response to antibiotic, isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: LytB protein (InterPro:IPR003451); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G14050No description available.A08+View
BR01G03800No description available.A01+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G13930No description available.Bvchr9.sca026-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00062G01010No description available.supercontig_62+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G09870No description available.scaffold_9+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G12870No description available.Gm11-View
GM12G05010No description available.Gm12-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G0690304-hydroxy-3-methylbut-2-enyl diphosphate reductasechr4+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G1093004-hydroxy-3-methylbut-2-enyl diphosphate reductase (AHRD V1 ***- A2TGW4_9LAMI)%3B contains Interpro domain(s) IPR003451 LytB proteinch01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G0466104-hydroxy-3-methylbut-2-enyl diphosphate reductase (AHRD V1 ***- E6Y2X1_RAUVE); contains Interpro domain(s) IPR003451 LytB proteinchr01+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G32140similar to AT4G34350|HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)ch7-5-View


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Gene id
Species
Description
Chromosome
Strand