Anchorpoints

Gene id
CRU_007G03420
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G04150No description available.scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G36650plant-specific TFIIB-related protein Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus. plant-specific TFIIB-related protein (PBRP); FUNCTIONS IN: RNA polymerase II transcription factor activity, rDNA binding; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: plastid outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1); Has 1560 Blast hits to 1559 proteins in 341 species: Archae - 524; Bacteria - 1; Metazoa - 239; Fungi - 259; Plants - 166; Viruses - 3; Other Eukaryotes - 368 (source: NCBI BLink).4-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G55320No description available.A03-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G19600No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G08500No description available.CM3.5_scaffold00007+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G03360No description available.scaffold00006+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G10950No description available.scaffold_8+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G38520Transcription initiation factor IIB (TFIIB) (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G38090No description available.Gm01+View
GM11G07140No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G20450No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G031130No description available.chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G019250No description available.15-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G00010No description available.scaffold06512+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G019910transcription factor IIBchr5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G17340No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G02760No description available.Chr07-View
PT05G12490No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29634G00830No description available.29634-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G085470Transcription initiation factor IIB (AHRD V1 *-*- B5XD83_SALSA)%3B contains Interpro domain(s) IPR000812 Transcription factor TFIIB relatedch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028600Transcription initiation factor IIB (AHRD V1 *-** B5XD83_SALSA); contains Interpro domain(s) IPR000812 Transcription factor TFIIB relatedchr02-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G03610No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G34310similar to AT4G36650|ATPBRP (PLANT-SPECIFIC TFIIB-RELATED PROTEIN)ch7-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV04G02390name=GSVIVG01018985001;chr4+View


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Gene id
Species
Description
Chromosome
Strand