Anchorpoints

Gene id
CRU_006G35190
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_001G17020No description available.scaffold_1-View
CRU_001G00620No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G22510No description available.scaffold_2+View
AL6G40230No description available.scaffold_6-View
AL5G31800No description available.scaffold_5+View
AL4G34060No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G73670member of MAP Kinase MAP kinase 15 MAP kinase 15 (MPK15); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18150.3); Has 118424 Blast hits to 117259 proteins in 3821 species: Archae - 110; Bacteria - 13457; Metazoa - 43793; Fungi - 12258; Plants - 28693; Viruses - 571; Other Eukaryotes - 19542 (source: NCBI BLink).1+View
AT1G18150Encodes mitogen-activated protein kinase 8 (MPK8). MPK8 connects protein phosphorylation, Ca2+, and ROS in the wound-signaling pathway. ATMPK8; FUNCTIONS IN: MAP kinase activity; INVOLVED IN: signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 15 (TAIR:AT1G73670.1); Has 120859 Blast hits to 119547 proteins in 3851 species: Archae - 100; Bacteria - 13809; Metazoa - 44780; Fungi - 12408; Plants - 29345; Viruses - 570; Other Eukaryotes - 19847 (source: NCBI BLink). Protein kinase superfamily protein1-View
AT4G01370Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. MAP kinase 4 (MPK4); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: in 14 processes; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 11 (TAIR:AT1G01560.2); Has 123445 Blast hits to 122024 proteins in 4656 species: Archae - 100; Bacteria - 13145; Metazoa - 47072; Fungi - 12439; Plants - 29862; Viruses - 477; Other Eukaryotes - 20350 (source: NCBI BLink). MAP kinase 44+View
AT1G01560member of MAP Kinase MAP kinase 11 (MPK11); FUNCTIONS IN: MAP kinase activity, kinase activity; INVOLVED IN: signal transduction, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). MAP kinase 111+View
AT2G46070Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants. mitogen-activated protein kinase 12 mitogen-activated protein kinase 12 (MPK12); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 125734 Blast hits to 124415 proteins in 4732 species: Archae - 106; Bacteria - 13752; Metazoa - 47505; Fungi - 12616; Plants - 30542; Viruses - 578; Other Eukaryotes - 20635 (source: NCBI BLink).2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G28020No description available.A03+View
BR06G12870No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV1G06170No description available.Bvchr1.sca001+View
BV5G07010No description available.Bvchr5.sca002+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G10600No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00047G00510No description available.CM3.5_scaffold00047+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00184G00160No description available.supercontig_184-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00009G01370No description available.scaffold00009-View
CS00001G03470No description available.scaffold00001-View
CS00001G02550No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0005G00970No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G07260Mitogen-activated protein kinase homolog MMK2 (putative)LG7+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G08320No description available.Gm07-View
GM12G33950No description available.Gm12+View
GM03G01850No description available.Gm03-View
GM16G03670No description available.Gm16+View
GM09G39190No description available.Gm09+View
GM07G07270No description available.Gm07+View
GM05G37480No description available.Gm05+View
GM18G47140No description available.Gm18-View
GM09G40150No description available.Gm09+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G15880No description available.Chr01+View
GR08G12010No description available.Chr08+View
GR04G15670No description available.Chr04+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02658G00980No description available.scaffold02658+View
ME05280G00640No description available.scaffold05280-View
ME03581G01480No description available.scaffold03581+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G078690MAP kinasechr7-View
MT8G028720MAP kinasechr8+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G17060No description available.scaffold_2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G07510No description available.Chr14-View
PT14G08850No description available.Chr14-View
PT01G09990No description available.Chr01+View
PT02G16250No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30174G03270No description available.30174-View
RC30174G02260No description available.30174+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G094960Mitogen-activated protein kinase 4 (AHRD V1 **** D7R517_SOLLC)%3B contains Interpro domain(s) IPR008351 JNK MAP kinasech01+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G032370Mitogen-activated protein kinase 4 (AHRD V1 **** D7R517_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr01+View
ST05G022310Mitogen-activated protein kinase 4 (AHRD V1 **** D7R517_SOLLC); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr05+View
ST08G028940Mitogen-activated protein kinase (AHRD V1 **** Q8LT16_SOLTU); contains Interpro domain(s) IPR002290 Serine/threonine protein kinasechr08+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G35170No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G16140similar to AT1G18150|ATMPK8ch1-1-View
TP6G00700similar to AT4G00720|ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32)ch6-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G05440name=GSVIVG01026984001;chr15-View


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Chromosome
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