PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: CRU_006G28190
Organism: Capsella rubella

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
CRU_001G29820	No description available.	scaffold_1	+	View

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL6G32950	No description available.	scaffold_6	+	View
AL1G34290	No description available.	scaffold_1	+	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G10510	Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Subtilase family protein	4	+	View
AT1G32940	Subtilase family protein SBT3.5; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT1G32960.1); Has 6590 Blast hits to 6094 proteins in 1001 species: Archae - 208; Bacteria - 3597; Metazoa - 86; Fungi - 174; Plants - 1956; Viruses - 0; Other Eukaryotes - 569 (source: NCBI BLink).	1	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR02G27340	No description available.	A02	-	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00009G03200	No description available.	scaffold00009	+	View

Gossypium raimondii

Gene id	Description	Chromosome	Strand	Multiplicon
GR08G26050	No description available.	Chr08	+	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC30068G00930	No description available.	30068	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP6G06870	similar to AT4G10540\|subtilase family protein	ch6-1	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV02G05910	name=GSVIVG01019686001;	chr2	+	View