Anchorpoints
- Gene id
- CRU_006G06750
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL6G07700 | No description available. | scaffold_6 | + | View |
AL8G27310 | No description available. | scaffold_8 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G61130 | plasmodesmata callose-binding protein 1 (PDCB1); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: callose deposition in cell wall; LOCATED IN: plasmodesma, anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: glucan endo-1,3-beta-glucosidase-like protein 3 (TAIR:AT5G08000.1); Has 2214 Blast hits to 2014 proteins in 207 species: Archae - 0; Bacteria - 106; Metazoa - 136; Fungi - 241; Plants - 1436; Viruses - 12; Other Eukaryotes - 283 (source: NCBI BLink). Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose. plasmodesmata callose-binding protein 1 | 5 | - | View |
AT5G08000 | glucan endo-1,3-beta-glucosidase-like protein 3 'glucan endo-1,3-beta-glucosidase-like protein 3' (E13L3); FUNCTIONS IN: callose binding, polysaccharide binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasmodesma, anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: plasmodesmata callose-binding protein 1 (TAIR:AT5G61130.1); Has 1582 Blast hits to 1532 proteins in 101 species: Archae - 0; Bacteria - 6; Metazoa - 10; Fungi - 147; Plants - 1404; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose. | 5 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G05500 | No description available. | A09 | - | View |
BR10G25790 | No description available. | A10 | + | View |
BR02G38040 | No description available. | A02 | - | View |
BR03G40730 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G75840 | No description available. | Bvchr5_un.sca003 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G24740 | No description available. | Chr5 | - | View |
CL04G11650 | No description available. | Chr4 | - | View |
CL06G16270 | No description available. | Chr6 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00016G04800 | No description available. | CM3.5_scaffold00016 | + | View |
CM00001G01130 | No description available. | CM3.5_scaffold00001 | + | View |
CM00030G01450 | No description available. | CM3.5_scaffold00030 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00094G00400 | No description available. | supercontig_94 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00122G00480 | No description available. | scaffold00122 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G25900 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G12210 | Glucan endo-1,3-beta-glucosidase-like protein 3, Precursor (similar to) | LG5 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G00470 | No description available. | Gm05 | - | View |
GM17G08570 | No description available. | Gm17 | + | View |
GM06G21982 | No description available. | Gm06 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G19850 | No description available. | Chr08 | + | View |
GR01G23020 | No description available. | Chr01 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD06G016460 | No description available. | 6 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08359G01710 | No description available. | scaffold08359 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT4G109490 | carbohydrate-binding X8 domain protein | chr4 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G20760 | No description available. | scaffold_5 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G03810 | No description available. | 30170 | - | View |
RC30138G01500 | No description available. | 30138 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G115200 | Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE)%3B contains Interpro domain(s) IPR012946 X8 | ch03 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G028700 | Glucan endo-1 3-beta-glucosidase 1 (AHRD V1 *-*- B6TW10_MAIZE); contains Interpro domain(s) IPR012946 X8 | chr03 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G02440 | No description available. | scaffold_8 | - | View |
TC0003G10430 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G34950 | similar to AT5G08000|E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3) | ch6-6 | - | View |
TP2G24380 | similar to AT5G61130|PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1) | ch2-4 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G02730 | name=GSVIVG01007873001; | chr17 | + | View |