Anchorpoints

Gene id
CRU_006G03550
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_003G09410No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G04150No description available.scaffold_6+View
AL3G10960No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G04770Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane. cationic amino acid transporter 6 cationic amino acid transporter 6 (CAT6); CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 7 (TAIR:AT3G10600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View
AT3G10600cationic amino acid transporter 7 cationic amino acid transporter 7 (CAT7); FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.02 two leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 6 (TAIR:AT5G04770.1); Has 33338 Blast hits to 33265 proteins in 2295 species: Archae - 501; Bacteria - 26895; Metazoa - 1960; Fungi - 2417; Plants - 365; Viruses - 0; Other Eukaryotes - 1200 (source: NCBI BLink). Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G01620No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G08180No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00040G01400No description available.CM3.5_scaffold00040+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G02390No description available.scaffold_10+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G42440No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G22970No description available.Chr11+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G111740cationic amino acid transporterchr1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G01710No description available.Chr08+View
PT10G24100No description available.Chr10+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G006710Cationic amino acid transporter (AHRD V1 ***- B9HVV3_POPTR)%3B contains Interpro domain(s) IPR015606 Cationic amino acid transporterch11-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G38050similar to AT5G04770|CAT6 (CATIONIC AMINO ACID TRANSPORTER 6)ch6-6-View
TP3G08910similar to AT3G10600|CAT7 (CATIONIC AMINO ACID TRANSPORTER 7)ch3-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G11390name=GSVIVG01034656001;chr13+View


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Gene id
Species
Description
Chromosome
Strand