Anchorpoints
- Gene id
- CRU_005G20950
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G21050 | No description available. | scaffold_4 | - | View |
CRU_006G00990 | No description available. | scaffold_6 | + | View |
CRU_002G23020 | No description available. | scaffold_2 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL4G26220 | No description available. | scaffold_4 | - | View |
AL2G26440 | No description available. | scaffold_2 | - | View |
AL6G01330 | No description available. | scaffold_6 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G39710 | Eukaryotic aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). | 2 | - | View |
AT5G02190 | encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. PROMOTION OF CELL SURVIVAL 1 (PCS1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G39710.1); Has 2066 Blast hits to 2053 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 96; Plants - 1822; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Eukaryotic aspartyl protease family protein | 5 | + | View |
AT1G77480 | Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1752 Blast hits to 1744 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1631; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G36430 | No description available. | A09 | - | View |
BR05G06100 | No description available. | A05 | + | View |
BR04G23590 | No description available. | A04 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV2G05620 | No description available. | Bvchr2.sca001 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL11G00600 | No description available. | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00008G01670 | No description available. | CM3.5_scaffold00008 | - | View |
CM00011G01690 | No description available. | CM3.5_scaffold00011 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00001G04200 | No description available. | supercontig_1 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G26130 | No description available. | scaffold_11 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G12710 | Aspartic proteinase nepenthesin-1, Precursor (probable) | LG6 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM11G34150 | No description available. | Gm11 | - | View |
GM04G42760 | No description available. | Gm04 | + | View |
GM07G16100 | No description available. | Gm07 | - | View |
GM02G41640 | No description available. | Gm02 | - | View |
GM14G07310 | No description available. | Gm14 | + | View |
GM10G43420 | No description available. | Gm10 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G20120 | No description available. | Chr10 | - | View |
GR11G26690 | No description available. | Chr11 | - | View |
GR06G17140 | No description available. | Chr06 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME08265G02250 | No description available. | scaffold08265 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G068000 | aspartic proteinase nepenthesin | chr3 | - | View |
MT5G080330 | aspartic protease family protein C putative | chr5 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS01G62630 | aspartic proteinase nepenthesin precursor, putative, expressed | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_002G22920 | No description available. | scaffold_2 | - | View |
PPE_006G26560 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G08760 | No description available. | Chr06 | - | View |
PT08G05800 | No description available. | Chr08 | - | View |
PT10G20140 | No description available. | Chr10 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0010G03480 | No description available. | scaffold_10r | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G40250 | similar to AT5G02190|PCS1 (PROMOTION OF CELL SURVIVAL 1) | ch6-6 | - | View |
TP4G21970 | similar to AT2G39710|aspartyl protease family protein | ch4-6 | - | View |
TP5G06940 | similar to AT2G39710|aspartyl protease family protein | ch5-1 | + | View |