Anchorpoints

Gene id
CRU_005G20950
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_004G21050No description available.scaffold_4-View
CRU_006G00990No description available.scaffold_6+View
CRU_002G23020No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G26220No description available.scaffold_4-View
AL2G26440No description available.scaffold_2-View
AL6G01330No description available.scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G39710Eukaryotic aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G02190.1); Has 2560 Blast hits to 2551 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 620; Fungi - 65; Plants - 1821; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).2-View
AT5G02190encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. PROMOTION OF CELL SURVIVAL 1 (PCS1); CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT2G39710.1); Has 2066 Blast hits to 2053 proteins in 143 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 96; Plants - 1822; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). Eukaryotic aspartyl protease family protein5+View
AT1G77480Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G44130.1); Has 1752 Blast hits to 1744 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 23; Plants - 1631; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G36430No description available.A09-View
BR05G06100No description available.A05+View
BR04G23590No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV2G05620No description available.Bvchr2.sca001-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G00600No description available.Chr11-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00008G01670No description available.CM3.5_scaffold00008-View
CM00011G01690No description available.CM3.5_scaffold00011+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G04200No description available.supercontig_1-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G26130No description available.scaffold_11+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G12710Aspartic proteinase nepenthesin-1, Precursor (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G34150No description available.Gm11-View
GM04G42760No description available.Gm04+View
GM07G16100No description available.Gm07-View
GM02G41640No description available.Gm02-View
GM14G07310No description available.Gm14+View
GM10G43420No description available.Gm10+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G20120No description available.Chr10-View
GR11G26690No description available.Chr11-View
GR06G17140No description available.Chr06+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08265G02250No description available.scaffold08265-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G068000aspartic proteinase nepenthesinchr3-View
MT5G080330aspartic protease family protein C putativechr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G62630aspartic proteinase nepenthesin precursor, putative, expressed1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_002G22920No description available.scaffold_2-View
PPE_006G26560No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G08760No description available.Chr06-View
PT08G05800No description available.Chr08-View
PT10G20140No description available.Chr10+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0010G03480No description available.scaffold_10r-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G40250similar to AT5G02190|PCS1 (PROMOTION OF CELL SURVIVAL 1)ch6-6-View
TP4G21970similar to AT2G39710|aspartyl protease family proteinch4-6-View
TP5G06940similar to AT2G39710|aspartyl protease family proteinch5-1+View


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Gene id
Species
Description
Chromosome
Strand