Anchorpoints

Gene id
CRU_005G19020
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G23700No description available.scaffold_5+View
AL4G23210No description available.scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G53650Histone superfamily protein Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1); Has 3251 Blast hits to 3245 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 2223; Fungi - 201; Plants - 465; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink).3+View
AT2G37470Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1); Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0; Bacteria - 0; Metazoa - 2242; Fungi - 218; Plants - 466; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). Histone superfamily protein2+View
AT5G02570Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1); Has 3216 Blast hits to 3216 proteins in 325 species: Archae - 0; Bacteria - 0; Metazoa - 2228; Fungi - 200; Plants - 462; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). Histone superfamily protein5-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G13930No description available.A07+View
BR04G05220No description available.A04-View
BR09G34860No description available.A09+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL10G18890No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00011G02050No description available.CM3.5_scaffold00011-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00190G00160No description available.supercontig_190-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G17890No description available.scaffold_10-View
EG0002G33030No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G13680Probable histone H2B.3 (putative)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G19470No description available.Gm13-View
GM11G15050No description available.Gm11-View
GM12G07030No description available.Gm12-View
GM19G35690No description available.Gm19-View
GM03G32980No description available.Gm03-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G42440No description available.Chr09+View
GR03G13540No description available.Chr03-View
GR13G26470No description available.Chr13-View
GR02G25390No description available.Chr02+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G009530No description available.chr5-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G008290No description available.11-View
MD12G012880No description available.12+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G068600histone H2A 6chr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17084Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed3+View
OS01G62230Histone H2B.11 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G25800No description available.scaffold_6+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G031680Histone H2B (AHRD V1 ***- C6SWE9_SOYBN); contains Interpro domain(s) IPR000558 Histone H2Bchr06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G04290No description available.scaffold_5-View
TC0009G32070No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G08710similar to AT3G53650|histone H2B, putativech5-1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G32150No description available.8+View


Download

Gene id
Species
Description
Chromosome
Strand