Anchorpoints
- Gene id
- CRU_005G19020
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G23700 | No description available. | scaffold_5 | + | View |
AL4G23210 | No description available. | scaffold_4 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G53650 | Histone superfamily protein Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1); Has 3251 Blast hits to 3245 proteins in 328 species: Archae - 0; Bacteria - 2; Metazoa - 2223; Fungi - 201; Plants - 465; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). | 3 | + | View |
AT2G37470 | Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleus, nucleosome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1); Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0; Bacteria - 0; Metazoa - 2242; Fungi - 218; Plants - 466; Viruses - 0; Other Eukaryotes - 367 (source: NCBI BLink). Histone superfamily protein | 2 | + | View |
AT5G02570 | Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: nucleolus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1); Has 3216 Blast hits to 3216 proteins in 325 species: Archae - 0; Bacteria - 0; Metazoa - 2228; Fungi - 200; Plants - 462; Viruses - 0; Other Eukaryotes - 326 (source: NCBI BLink). Histone superfamily protein | 5 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR07G13930 | No description available. | A07 | + | View |
BR04G05220 | No description available. | A04 | - | View |
BR09G34860 | No description available. | A09 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G18890 | No description available. | Chr10 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00011G02050 | No description available. | CM3.5_scaffold00011 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00190G00160 | No description available. | supercontig_190 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0010G17890 | No description available. | scaffold_10 | - | View |
EG0002G33030 | No description available. | scaffold_2 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G13680 | Probable histone H2B.3 (putative) | LG6 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM13G19470 | No description available. | Gm13 | - | View |
GM11G15050 | No description available. | Gm11 | - | View |
GM12G07030 | No description available. | Gm12 | - | View |
GM19G35690 | No description available. | Gm19 | - | View |
GM03G32980 | No description available. | Gm03 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR09G42440 | No description available. | Chr09 | + | View |
GR03G13540 | No description available. | Chr03 | - | View |
GR13G26470 | No description available. | Chr13 | - | View |
GR02G25390 | No description available. | Chr02 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ5G009530 | No description available. | chr5 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD11G008290 | No description available. | 11 | - | View |
MD12G012880 | No description available. | 12 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT1G068600 | histone H2A 6 | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS03G17084 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | 3 | + | View |
OS01G62230 | Histone H2B.11 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | 1 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G25800 | No description available. | scaffold_6 | + | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST06G031680 | Histone H2B (AHRD V1 ***- C6SWE9_SOYBN); contains Interpro domain(s) IPR000558 Histone H2B | chr06 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G04290 | No description available. | scaffold_5 | - | View |
TC0009G32070 | No description available. | scaffold_9 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G08710 | similar to AT3G53650|histone H2B, putative | ch5-1 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G32150 | No description available. | 8 | + | View |