Anchorpoints
- Gene id
- CRU_005G18880
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G18670 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G23490 | No description available. | scaffold_5 | - | View |
AL4G23010 | No description available. | scaffold_4 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G53510 | ABC-2 type transporter family protein ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT2G37360.1); Has 392871 Blast hits to 356829 proteins in 4146 species: Archae - 6979; Bacteria - 312762; Metazoa - 8946; Fungi - 6247; Plants - 5690; Viruses - 12; Other Eukaryotes - 52235 (source: NCBI BLink). | 3 | - | View |
AT2G37360 | ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport; LOCATED IN: membrane; EXPRESSED IN: petal, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Pigment precursor permease (InterPro:IPR005284), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G53510.1); Has 392085 Blast hits to 356271 proteins in 4132 species: Archae - 6993; Bacteria - 312114; Metazoa - 8789; Fungi - 6117; Plants - 5602; Viruses - 12; Other Eukaryotes - 52458 (source: NCBI BLink). ABC-2 type transporter family protein | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR04G22250 | No description available. | A04 | - | View |
BR09G34740 | No description available. | A09 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL10G18750 | No description available. | Chr10 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00011G02180 | No description available. | CM3.5_scaffold00011 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00114G00170 | No description available. | supercontig_114 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM19G35970 | No description available. | Gm19 | + | View |
GM03G33250 | No description available. | Gm03 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR07G37490 | No description available. | Chr07 | - | View |
GR02G25260 | No description available. | Chr02 | - | View |
GR06G17710 | No description available. | Chr06 | - | View |
GR13G02390 | No description available. | Chr13 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ1G063480 | No description available. | chr1 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT7G100120 | white-brown-complex ABC transporter family protein | chr7 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G24340 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT06G12610 | No description available. | Chr06 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30078G01020 | No description available. | 30078 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G069710 | ABC transporter G family member 3 (AHRD V1 ***- AB3G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporter | ch11 | - | View |
SL05G054890 | ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH)%3B contains Interpro domain(s) IPR013525 ABC-2 type transporter | ch05 | + | View |
SL09G008000 | ABC transporter G family member 28 (AHRD V1 **** AB28G_ARATH)%3B contains Interpro domain(s) IPR003439 ABC transporter-like | ch09 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G007520 | ABC transporter G family member 28 (AHRD V1 **** AB28G_ARATH); contains Interpro domain(s) IPR003439 ABC transporter-like | chr09 | - | View |
ST09G006020 | ABC transporter G family member 20 (AHRD V1 **** AB20G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporter | chr09 | + | View |
ST05G027960 | ABC transporter G family member 1 (AHRD V1 **** AB1G_ARATH); contains Interpro domain(s) IPR013525 ABC-2 type transporter | chr05 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0005G04660 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP5G08820 | similar to AT3G53510|ABC transporter family protein | ch5-1 | + | View |
TP4G19670 | similar to AT2G37360|ABC transporter family protein | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV08G02050 | name=GSVIVG01025582001; | chr8 | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM08G32290 | No description available. | 8 | - | View |