Anchorpoints

Gene id
CRU_005G10740
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G13740No description available.scaffold_5-View
AL8G26460No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60220tetraspanin4 (TET4); INVOLVED IN: aging; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin3 (TAIR:AT3G45600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Member of TETRASPANIN family tetraspanin45+View
AT3G45600tetraspanin3 tetraspanin3 (TET3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: aging; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499), Tetraspanin, subgroup (InterPro:IPR000301); BEST Arabidopsis thaliana protein match is: tetraspanin4 (TAIR:AT5G60220.1); Has 665 Blast hits to 663 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 224; Fungi - 0; Plants - 435; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). Member of TETRASPANIN family3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G22340No description available.A01-View
BR03G10090No description available.A03-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G21010No description available.Chr2+View
CL03G02440No description available.Chr3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00082G00650No description available.CM3.5_scaffold00082+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01710No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19790No description available.scaffold_2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G07660No description available.Gm12-View
GM11G15790No description available.Gm11+View
GM13G40390No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G12110No description available.Chr06-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00600No description available.scaffold03750+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G09160No description available.scaffold_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G075360Senescence-associated protein (AHRD V1 ***- B6T9C5_MAIZE)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroupch06-View
SL11G072480Senescence-associated protein (AHRD V1 ***- B6T9C5_MAIZE)%3B contains Interpro domain(s) IPR000301 Tetraspanin%2C subgroupch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G029400Senescence-associated protein (AHRD V1 ***- B6T9C5_MAIZE); contains Interpro domain(s) IPR000301 Tetraspanin, subgroupchr11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G25720No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G21850similar to AT5G60220|TET4 (TETRASPANIN4)ch6-6+View
TP5G15890similar to AT3G45600|TET3 (TETRASPANIN3)ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04830name=GSVIVG01025122001;chr6-View


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Gene id
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Description
Chromosome
Strand