Anchorpoints

Gene id
CRU_005G10590
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G13550No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G45460IBR domain containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867); BEST Arabidopsis thaliana protein match is: RING/U-box protein with C6HC-type zinc finger (TAIR:AT3G45480.1); Has 1686 Blast hits to 1674 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 656; Fungi - 285; Plants - 509; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink). IBR domain containing protein3-View
AT5G60250zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). zinc finger (C3HC4-type RING finger) family protein5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G10070No description available.A03-View
BR06G18880No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G02410No description available.Chr3+View
CL02G21030No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00082G00670No description available.CM3.5_scaffold00082+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00139G00610No description available.supercontig_139+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01770No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19830No description available.scaffold_2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G07640No description available.Gm12-View
GM11G15820No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR01G12980No description available.Chr01+View
GR06G12080No description available.Chr06-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00640No description available.scaffold03750+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G09280No description available.scaffold_6+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G029220IBR finger domain protein (AHRD V1 *--- Q4WL53_ASPFU); contains Interpro domain(s) IPR002867 Zinc finger, C6HC-typechr11-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G25650No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G21870similar to AT5G60250|zinc finger (C3HC4-type RING finger) family proteinch6-6+View
TP5G15900similar to AT3G45540|zinc finger (C3HC4-type RING finger) family proteinch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04900name=GSVIVG01025129001;chr6-View


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Gene id
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Description
Chromosome
Strand