Anchorpoints

Gene id
CRU_005G07490
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_007G35310No description available.scaffold_7-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G39180No description available.scaffold_7-View
AL5G09060No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G39320UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT3G29360.2); Has 13476 Blast hits to 13452 proteins in 2147 species: Archae - 313; Bacteria - 7039; Metazoa - 213; Fungi - 97; Plants - 213; Viruses - 14; Other Eukaryotes - 5587 (source: NCBI BLink). UDP-glucose 6-dehydrogenase family protein5+View
AT3G29360UDP-glucose 6-dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucose/GDP-mannose dehydrogenase, N-terminal (InterPro:IPR001732), 6-phosphogluconate dehydrogenase, C-terminal-like (InterPro:IPR008927), UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-binding domain (InterPro:IPR014028), UDP-glucose/GDP-mannose dehydrogenase, C-terminal (InterPro:IPR014027), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose/GDP-mannose dehydrogenase, dimerisation (InterPro:IPR014026), Nucleotide sugar dehydrogenase (InterPro:IPR017476); BEST Arabidopsis thaliana protein match is: UDP-glucose 6-dehydrogenase family protein (TAIR:AT5G39320.1); Has 13454 Blast hits to 13430 proteins in 2148 species: Archae - 313; Bacteria - 7048; Metazoa - 213; Fungi - 99; Plants - 213; Viruses - 14; Other Eukaryotes - 5554 (source: NCBI BLink). Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides. UDP-glucose 6-dehydrogenase family protein3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G31690No description available.A06+View
BR04G08760No description available.A04+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL06G16350No description available.Chr6-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01610No description available.supercontig_14-View
CP00001G01050No description available.supercontig_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02400No description available.scaffold00015-View
CS00003G05180No description available.scaffold00003-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G03500No description available.Gm19-View
GM01G06970No description available.Gm01-View
GM20G03221No description available.Gm20+View
GM02G12870No description available.Gm02-View
GM08G26520UDP-glucose 6-dehydrogenase 1Gm08-View
GM18G50000UDP-glucose 6-dehydrogenase 1Gm18-View
GM13G06050No description available.Gm13-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G08180No description available.Chr07-View
GR05G14470No description available.Chr05-View
GR13G09260No description available.Chr13-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G017610No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD16G003140No description available.16+View
MD13G004120No description available.13+View
MD14G019880No description available.14-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06609G00370No description available.scaffold06609+View
ME08359G01790No description available.scaffold08359+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G012950UDP-glucose 6-dehydrogenase family proteinchr7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G55070UDP-glucose 6-dehydrogenase 3 UDP-glucose 6-dehydrogenase, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G29580No description available.scaffold_1-View
PPE_005G20670No description available.scaffold_5-View
PPE_003G23690No description available.scaffold_3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G09200No description available.Chr17-View
PT08G09430No description available.Chr08+View
PT10G15980No description available.Chr10-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G01730No description available.30138+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G069550UDP-D-glucose dehydrogenase (AHRD V1 **** D2WK27_GOSHI)%3B contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation and substrate-bindingch06+View
SL02G067080UDP-D-glucose dehydrogenase (AHRD V1 ***- D2WK25_GOSHI)%3B contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation and substrate-bindingch02-View
SL02G088690UDP-glucose 6-dehydrogenase (AHRD V1 **** B6TBY8_MAIZE)%3B contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase%2C N-terminalch02-View
SL03G115380UDP-glucose dehydrogenase (AHRD V1 **** B1N754_EUCGR)%3B contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation and substrate-bindingch03+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G012920UDP-D-glucose dehydrogenase (AHRD V1 ***- D2WK25_GOSHI); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr02-View
ST03G028860UDP-glucose dehydrogenase (AHRD V1 ***- B1N754_EUCGR); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr03+View
ST06G026510UDP-glucose dehydrogenase (AHRD V1 ***- Q6RK07_9MAGN); contains Interpro domain(s) IPR014028 UDP-glucose/GDP-mannose dehydrogenase, dimerisation and substrate-bindingchr06+View
ST02G034190UDP-glucose 6-dehydrogenase (AHRD V1 ***- B6TBY8_MAIZE); contains Interpro domain(s) IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminalchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G09670No description available.scaffold_4-View
TC0002G33270No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G02670similar to AT5G39320|UDP-glucose 6-dehydrogenase, putativech7-1-View
TP2G17950similar to AT3G29360|UDP-glucose 6-dehydrogenase, putativech2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV14G02960name=GSVIVG01011507001;chr14-View
VV17G02960name=GSVIVG01007910001;chr17-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G53260No description available.1+View
ZM05G03990LOC1002828475+View


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Gene id
Species
Description
Chromosome
Strand