Anchorpoints
- Gene id
- CRU_005G01680
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G13330 | No description available. | scaffold_1 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G15020 | No description available. | scaffold_1 | + | View |
AL5G02480 | No description available. | scaffold_5 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G02950 | Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. phytochrome kinase substrate 1 phytochrome kinase substrate 1 (PKS1); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 2 (TAIR:AT1G14280.1); Has 564 Blast hits to 331 proteins in 102 species: Archae - 0; Bacteria - 114; Metazoa - 82; Fungi - 26; Plants - 127; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). | 2 | - | View |
AT1G14280 | phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). phytochrome kinase substrate 2 Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3. | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR02G30450 | No description available. | A02 | + | View |
BR09G21460 | No description available. | A09 | + | View |
BR06G09490 | No description available. | A06 | + | View |
BR06G34760 | No description available. | A06 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV6G02820 | No description available. | Bvchr6.sca028 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL05G25310 | No description available. | Chr5 | + | View |
CL04G12150 | No description available. | Chr4 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G00630 | No description available. | CM3.5_scaffold00001 | - | View |
CM00016G04140 | No description available. | CM3.5_scaffold00016 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00128G00170 | No description available. | supercontig_128 | - | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00003G04230 | No description available. | scaffold00003 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0007G19420 | No description available. | scaffold_7 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV0G05620 | Phytochrome kinase substrate 1 (probable) | scf0513158 | + | View |
FV5G13470 | Phytochrome kinase substrate 1 (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM02G11880 | No description available. | Gm02 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR05G14110 | No description available. | Chr05 | - | View |
GR13G08480 | No description available. | Chr13 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD13G004780 | No description available. | 13 | + | View |
MD16G003910 | No description available. | 16 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME11495G00330 | No description available. | scaffold11495 | + | View |
ME08359G02410 | No description available. | scaffold08359 | + | View |
ME12794G02070 | No description available. | scaffold12794 | - | View |
ME03834G00110 | No description available. | scaffold03834 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G19670 | No description available. | scaffold_5 | - | View |
PPE_001G28470 | No description available. | scaffold_1 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT15G06260 | No description available. | Chr15 | + | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30147G07920 | No description available. | 30147 | - | View |
RC29813G00280 | No description available. | 29813 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL05G007480 | Phytochrome kinase substrate 1 (AHRD V1 ***- D7LQB9_ARALY) | ch05 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST03G029600 | Phytochrome kinase substrate 1 (AHRD V1 ***- D7LQB9_ARALY) | chr03 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G13980 | similar to AT2G02950|PKS1 (PHYTOCHROME KINASE SUBSTRATE 1) | ch2-4 | - | View |
TP1G12630 | similar to AT1G14280|PKS2 (PHYTOCHROME KINASE SUBSTRATE 2) | ch1-1 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV01G12170 | name=GSVIVG01019998001; | chr1 | - | View |