Anchorpoints

Gene id
CRU_005G01680
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_001G13330No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G15020No description available.scaffold_1+View
AL5G02480No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G02950Encodes a basic soluble protein which can independently bind to either PHYA or PHYB, regardless of whether the phytochromes are in the Pr or Pfr state. PKS1 can be phosphorylated by oat phyA in vitro in a light regulated manner. It is postulated to be a negative regulator of phyB signalling. phytochrome kinase substrate 1 phytochrome kinase substrate 1 (PKS1); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 2 (TAIR:AT1G14280.1); Has 564 Blast hits to 331 proteins in 102 species: Archae - 0; Bacteria - 114; Metazoa - 82; Fungi - 26; Plants - 127; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink).2-View
AT1G14280phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). phytochrome kinase substrate 2 Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G30450No description available.A02+View
BR09G21460No description available.A09+View
BR06G09490No description available.A06+View
BR06G34760No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G02820No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G25310No description available.Chr5+View
CL04G12150No description available.Chr4+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G00630No description available.CM3.5_scaffold00001-View
CM00016G04140No description available.CM3.5_scaffold00016-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00128G00170No description available.supercontig_128-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G04230No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G19420No description available.scaffold_7+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G05620Phytochrome kinase substrate 1 (probable)scf0513158+View
FV5G13470Phytochrome kinase substrate 1 (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G11880No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G14110No description available.Chr05-View
GR13G08480No description available.Chr13-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G004780No description available.13+View
MD16G003910No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11495G00330No description available.scaffold11495+View
ME08359G02410No description available.scaffold08359+View
ME12794G02070No description available.scaffold12794-View
ME03834G00110No description available.scaffold03834+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G19670No description available.scaffold_5-View
PPE_001G28470No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT15G06260No description available.Chr15+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30147G07920No description available.30147-View
RC29813G00280No description available.29813-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G007480Phytochrome kinase substrate 1 (AHRD V1 ***- D7LQB9_ARALY)ch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST03G029600Phytochrome kinase substrate 1 (AHRD V1 ***- D7LQB9_ARALY)chr03+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G13980similar to AT2G02950|PKS1 (PHYTOCHROME KINASE SUBSTRATE 1)ch2-4-View
TP1G12630similar to AT1G14280|PKS2 (PHYTOCHROME KINASE SUBSTRATE 2)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G12170name=GSVIVG01019998001;chr1-View


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Gene id
Species
Description
Chromosome
Strand