Anchorpoints

Gene id
CRU_005G01500
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G01830No description available.scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G02710PAS/LOV protein B (PLPB); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 7028 Blast hits to 3884 proteins in 881 species: Archae - 167; Bacteria - 4096; Metazoa - 907; Fungi - 432; Plants - 1066; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink). PAS/LOV protein B Encodes a putative blue light receptor protein.2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G34880No description available.A06+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G03410No description available.Bvchr6.sca028+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G03880No description available.CM3.5_scaffold00016-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00003G03780No description available.scaffold00003-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G06130Protein TWIN LOV 1 (putative)scf0513158+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM01G04920No description available.Gm01-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR05G13900No description available.Chr05-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G005290No description available.13+View
MD16G004250No description available.16+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME11495G00670No description available.scaffold11495+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G27920No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G007020Potassium voltage-gated channel subfamily H member 1 (AHRD V1 *--- KCNH1_RAT)%3B contains Interpro domain(s) IPR013655 PAS fold-3ch05-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST05G011350Potassium voltage-gated channel subfamily H member 1 (AHRD V1 *--- KCNH1_RAT); contains Interpro domain(s) IPR013655 PAS fold-3chr05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G35340No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G13820similar to AT2G02710|PLPB (PAS/LOV PROTEIN B)ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G12730name=GSVIVG01020075001;chr1-View


Download

Gene id
Species
Description
Chromosome
Strand