Anchorpoints

Gene id
CRU_004G28850
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_005G27600No description available.scaffold_5+View
CRU_003G05750No description available.scaffold_3+View
CRU_001G08250No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G35400No description available.scaffold_4+View
AL3G06730No description available.scaffold_3+View
AL1G08990No description available.scaffold_1-View
AL5G33370No description available.scaffold_5+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G62300Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7); FUNCTIONS IN: RNA binding; LOCATED IN: nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Agenet (InterPro:IPR008395), Tudor-like, plant (InterPro:IPR014002), Protein of unknown function DUF724 (InterPro:IPR007930); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 6 (TAIR:AT2G47230.1).3+View
AT3G06520agenet domain-containing protein; FUNCTIONS IN: RNA binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT1G09320.1); Has 523 Blast hits to 271 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 518; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). agenet domain-containing protein3+View
AT1G09320agenet domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), Agenet (InterPro:IPR008395); BEST Arabidopsis thaliana protein match is: agenet domain-containing protein (TAIR:AT3G06520.1); Has 769 Blast hits to 316 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 3; Plants - 733; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). agenet domain-containing protein1-View
AT2G47220DOMAIN OF UNKNOWN FUNCTION 724 5 DOMAIN OF UNKNOWN FUNCTION 724 5 (DUF5); FUNCTIONS IN: 3'-5'-exoribonuclease activity, oxidoreductase activity, RNA binding; INVOLVED IN: metabolic process, RNA processing; LOCATED IN: nucleus; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: lateral root emergence; CONTAINS InterPro DOMAIN/s: Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Protein of unknown function DUF724 (InterPro:IPR007930), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: DOMAIN OF UNKNOWN FUNCTION 724 2 (TAIR:AT1G11420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G41360No description available.A09+View
BR04G00580No description available.A04-View
BR07G17370No description available.A07+View
BR05G00600No description available.A05-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G15780No description available.Bvchr5.sca025+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G04570No description available.Chr9+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00026G02290No description available.CM3.5_scaffold00026+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00018G00910No description available.supercontig_18-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G04680No description available.scaffold00004+View
CS00001G06240No description available.scaffold00001+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G07810No description available.scaffold_8+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G22810No description available.Gm20+View
GM10G28671No description available.Gm10+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR04G14520No description available.Chr04-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G020990No description available.12+View
MD04G015580No description available.4+View
MD17G021790No description available.17-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02264G01080No description available.scaffold02264+View
ME07571G00950No description available.scaffold07571+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G04180agenet domain containing protein, putative, expressed5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G31580No description available.scaffold_6+View
PPE_010G00680No description available.scaffold_10+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G00690No description available.Chr13+View
PT02G19230No description available.Chr02+View
PT14G11780No description available.Chr14+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29889G01100No description available.29889-View
RC30128G03210No description available.30128-View
RC30076G01770No description available.30076+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G079230Agenet domain-containing protein (AHRD V1 *-*- D7KQP5_ARALY)%3B contains Interpro domain(s) IPR007930 Protein of unknown function DUF724ch01+View
SL01G100780Agenet domain-containing protein (AHRD V1 ***- D7KJP0_ARALY)%3B contains Interpro domain(s) IPR008395 Agenetch01-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G023500Agenet domain-containing protein (AHRD V1 *-*- D7KJP0_ARALY); contains Interpro domain(s) IPR007930 Protein of unknown function DUF724chr01+View
ST01G038580Agenet domain-containing protein (AHRD V1 ***- D7KJP0_ARALY); contains Interpro domain(s) IPR008395 Agenetchr01-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0005G32270No description available.scaffold_5-View
TC0001G31670No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G01090similar to AT3G62300|agenet domain-containing proteinch5-1-View
TP1G07930similar to AT1G09320|agenet domain-containing proteinch1-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09570name=GSVIVG01028157001;chr7-View
VV14G09820name=GSVIVG01031264001;chr14+View


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Gene id
Species
Description
Chromosome
Strand