Anchorpoints

Gene id
CRU_004G08810
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G11870No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G28190Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS. Overexpression of a miR398-resistant form of CSD2 leads to more dramatic improvements in stress (hight light, Cu2+ and methyl viologen) tolerance than overexpression of wild-type CSD2. copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase 2 (CSD2); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 4720 Blast hits to 4704 proteins in 1488 species: Archae - 6; Bacteria - 1989; Metazoa - 1257; Fungi - 323; Plants - 669; Viruses - 141; Other Eukaryotes - 335 (source: NCBI BLink).2+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G12970No description available.A07+View
BR04G16080No description available.A04+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL02G21710No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00118G00120No description available.CM3.5_scaffold00118+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G00040No description available.supercontig_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00061G00530No description available.scaffold00061+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G33070No description available.scaffold_2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G08350Superoxide dismutase [Cu-Zn], chloroplastic, Precursor (similar to)LG1-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM12G30260No description available.Gm12+View
GM11G19840No description available.Gm11-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G10490No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G012540No description available.11-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08316G00570No description available.scaffold08316+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G057240superoxide dismutase [Cu-Zn] proteinchr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G11060No description available.scaffold_6+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G00510No description available.Chr09-View
PT04G21670No description available.Chr04+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29589G00430No description available.29589+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G066390Superoxide dismutase [Cu-Zn], chloroplastic Superoxide dismutase (AHRD V1 ***- Q7XAV2_SOLLC)%3B contains Interpro domain(s) IPR018152 Superoxide dismutase%2C copper/zinc%2C binding sitech11+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G024220Superoxide dismutase (AHRD V1 **** Q7XAV2_SOLLC); contains Interpro domain(s) IPR001424 Superoxide dismutase, copper/zinc bindingchr11+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G29360No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G11000similar to AT2G28190|CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)ch4-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G08800name=GSVIVG01031462001; Superoxide dismutase [Cu-Zn], chloroplasticchr6+View


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Gene id
Species
Description
Chromosome
Strand