Anchorpoints
- Gene id
- CRU_003G31680
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_008G17790 | No description available. | scaffold_8 | + | View |
CRU_007G09660 | No description available. | scaffold_7 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL7G11180 | No description available. | scaffold_7 | - | View |
AL3G39830 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G18650 | maternal effect embryo arrest 16 (MEE16); FUNCTIONS IN: zinc ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G30400.1); Has 9180 Blast hits to 9159 proteins in 289 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 782; Plants - 4907; Viruses - 48; Other Eukaryotes - 1290 (source: NCBI BLink). RING/U-box superfamily protein | 2 | - | View |
AT5G57750 | RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18650.1); Has 9542 Blast hits to 9521 proteins in 299 species: Archae - 0; Bacteria - 6; Metazoa - 2301; Fungi - 713; Plants - 5095; Viruses - 94; Other Eukaryotes - 1333 (source: NCBI BLink). RING/U-box superfamily protein | 5 | + | View |
AT4G30370 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G18670.1); Has 7837 Blast hits to 7816 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 2070; Fungi - 511; Plants - 4382; Viruses - 17; Other Eukaryotes - 857 (source: NCBI BLink). | 4 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR01G07070 | No description available. | A01 | - | View |
BR07G01800 | No description available. | A07 | - | View |
BR09G09890 | No description available. | A09 | - | View |
BR03G51550 | No description available. | A03 | + | View |
BR09G25090 | No description available. | A09 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00075G00170 | No description available. | supercontig_75 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0003G01680 | No description available. | scaffold_3 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM04G01680 | No description available. | Gm04 | - | View |
GM17G07580 | No description available. | Gm17 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G116000 | anaphase-promoting complex subunit 11 RING-H2 finger protein | chr3 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL07G006360 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch07 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G15560 | No description available. | scaffold_9 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G19430 | similar to AT5G57750|zinc finger (C3HC4-type RING finger) family protein | ch6-6 | + | View |
TP7G28240 | similar to AT4G30370|zinc finger (C3HC4-type RING finger) family protein | ch7-5 | - | View |
TP3G32140 | similar to AT2G18650|MEE16 (maternal effect embryo arrest 16) | ch3-6 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM06G28960 | No description available. | 6 | + | View |