Anchorpoints

Gene id
CRU_003G30380
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G38270No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G17520Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. Endoribonuclease/protein kinase IRE1-like IRE1A; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: inositol requiring 1-1 (TAIR:AT5G24360.1); Has 104790 Blast hits to 103944 proteins in 4127 species: Archae - 110; Bacteria - 12550; Metazoa - 37627; Fungi - 10369; Plants - 27162; Viruses - 328; Other Eukaryotes - 16644 (source: NCBI BLink).2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00044G01190No description available.scaffold00044+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G24560No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G13790No description available.Bvchr6.sca004-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G21140No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G10140No description available.CM3.5_scaffold00007-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G03490No description available.supercontig_6+View
CP00026G01620No description available.supercontig_26+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00017G02360No description available.scaffold00017-View
CS00002G06900No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0010G22030No description available.scaffold_10-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G11970Serine/threonine-protein kinase ppk4, Precursor (probable)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G09240No description available.Gm11-View
GM01G36200No description available.Gm01+View
GM09G32970No description available.Gm09+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G00130No description available.Chr03+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G010150No description available.2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07520G03550No description available.scaffold07520-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G073190endoribonuclease/kinase IRE1-like proteinchr8+View
MT5G024510endoribonuclease/kinase IRE1-like proteinchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G28820ribonuclease 2-5A family protein, expressed7+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G20580No description available.scaffold_7-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G00720No description available.Chr02+View
PT05G25400No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29830G00830No description available.29830-View
RC30170G07130No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G082470Serine threonine-protein kinase (AHRD V1 *-*- Q16QF5_AEDAE)%3B contains Interpro domain(s) IPR010513 Ribonuclease Lch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G025830Serine/threonine-protein kinase (AHRD V1 *-*- A6SFQ8_BOTFB); contains Interpro domain(s) IPR010513 Ribonuclease Lchr02+View
ST04G036100Serine threonine-protein kinase (AHRD V1 *-*- Q16QF5_AEDAE); contains Interpro domain(s) IPR010513 Ribonuclease Lchr04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G06110No description available.scaffold_8-View
TC0001G00350No description available.scaffold_1+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G30880similar to AT2G17520|IRE1Ach3-6+View


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Gene id
Species
Description
Chromosome
Strand