Anchorpoints

Gene id
CRU_003G22830
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_007G26870No description available.scaffold_7+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G26220No description available.scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G14250structural constituent of ribosome; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), UAS (InterPro:IPR006577), Ribosomal protein L2, C-terminal (InterPro:IPR022669), UBX (InterPro:IPR001012), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: UBX domain-containing protein (TAIR:AT1G59550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). structural constituent of ribosome This locus is annotated as a protein-coding gene in TAIR10. Based on communication with Jean-Luc GALLOIS (April 2013), this gene is split into two UBX domain-containing pseudogenes: one retains the original name: AT4G14250 (Chr4:8213237..8211984), one given a new locus identifier AT4G14245 (Chr4:8210231..8208985). Note that the Map Detail Image on the locus detial page and in GBrowse will not be updated until after the next genome release.4-View
AT3G23605Ubiquitin-like superfamily protein; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012); BEST Arabidopsis thaliana protein match is: structural constituent of ribosome (TAIR:AT4G14250.1); Has 105 Blast hits to 100 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). Ubiquitin-like superfamily protein3+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR04G06390No description available.A04+View
BR03G37600No description available.A03+View
BR01G27050No description available.A01-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP7G12210similar to AT4G14250|structural constituent of ribosomech7-4-View
TP3G21280similar to AT3G23605|UBX domain-containing proteinch3-1+View


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Gene id
Species
Description
Chromosome
Strand