Anchorpoints

Gene id
CRU_003G05550
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G06450No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G06350MATERNAL EFFECT EMBRYO ARREST 32 (MEE32); FUNCTIONS IN: NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Aldolase-type TIM barrel (InterPro:IPR013785), Quinate/shikimate 5-dehydrogenase (InterPro:IPR011342), NAD(P)-binding domain (InterPro:IPR016040), Dehydroquinase class I (InterPro:IPR001381), Shikimate dehydrogenase substrate binding, N-terminal (InterPro:IPR013708); Has 14455 Blast hits to 14453 proteins in 2669 species: Archae - 507; Bacteria - 10604; Metazoa - 0; Fungi - 391; Plants - 114; Viruses - 0; Other Eukaryotes - 2839 (source: NCBI BLink). dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway.3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00057G01210No description available.scaffold00057-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G40310No description available.A01+View
BR03G30410No description available.A03-View
BR02G34270No description available.A02-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00016G00990No description available.supercontig_16-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00001G08450No description available.scaffold00001+View
CS00011G02410No description available.scaffold00011-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G14270No description available.scaffold_2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03614G04120No description available.scaffold03614+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G02980No description available.Chr13-View
PT08G19610No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29726G00880No description available.29726-View
RC30128G00860No description available.30128+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G021770Shikimate dehydrogenase (AHRD V1 ***- B6TSW1_MAIZE); contains Interpro domain(s) IPR001381 Dehydroquinase class Ichr01+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G27770No description available.scaffold_4-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G05260similar to AT3G06350|MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)ch3-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G03610name=GSVIVG01017822001;chr5+View


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Gene id
Species
Description
Chromosome
Strand