Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CRU_003G03850
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G04550 | No description available. | scaffold_3 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G04820 | Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, TruD (InterPro:IPR001656), Pseudouridine synthase TruD, eukaryotic (InterPro:IPR017091), Pseudouridine synthase, TruD, insertion domain (InterPro:IPR011760); Has 2276 Blast hits to 2198 proteins in 933 species: Archae - 260; Bacteria - 1262; Metazoa - 203; Fungi - 153; Plants - 61; Viruses - 0; Other Eukaryotes - 337 (source: NCBI BLink). Pseudouridine synthase family protein | 3 | - | View |
Brassica rapa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BR03G29710 | No description available. | A03 | - | View |
Beta vulgaris
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BV4G10950 | No description available. | Bvchr4.sca008 | - | View |
Cucumis melo
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CM00069G00480 | No description available. | CM3.5_scaffold00069 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00117G00740 | No description available. | supercontig_117 | + | View |
Eucalyptus grandis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| EG0002G13720 | No description available. | scaffold_2 | - | View |
| EG0002G16560 | No description available. | scaffold_2 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV0G25100 | Putative pseudouridine synthase YOR243C (probable) | scf0513168 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM03G40600 | No description available. | Gm03 | + | View |
| GM19G43270 | No description available. | Gm19 | + | View |
Gossypium raimondii
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GR07G28400 | No description available. | Chr07 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD12G023710 | No description available. | 12 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03614G03560 | No description available. | scaffold03614 | - | View |
| ME03802G00870 | No description available. | scaffold03802 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G114850 | tRNA pseudouridine synthase | chr7 | + | View |
Prunus persica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPE_006G34500 | No description available. | scaffold_6 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT13G03880 | No description available. | Chr13 | + | View |
| PT05G05140 | No description available. | Chr05 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30128G00180 | No description available. | 30128 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL01G097590 | Pseudouridine synthase (AHRD V1 ***- A6ZP82_YEAS7)%3B contains Interpro domain(s) IPR001656 Pseudouridine synthase%2C TruD | ch01 | - | View |
Solanum tuberosum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ST01G035060 | Pseudouridine synthase (AHRD V1 ***- A6ZP82_YEAS7); contains Interpro domain(s) IPR020103 Pseudouridine synthase, catalytic domain | chr01 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC0005G28590 | No description available. | scaffold_5 | - | View |
Thellungiella parvula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TP3G03650 | similar to AT3G04820|pseudouridine synthase | ch3-1 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV14G03420 | name=GSVIVG01021833001; | chr14 | + | View |