Anchorpoints

Gene id
CRU_003G01400
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_006G13660No description available.scaffold_6-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G01500No description available.scaffold_3-View
AL6G15680No description available.scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G15840Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1. B-box type zinc finger protein with CCT domain CONSTANS (CO); CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 2 (TAIR:AT3G02380.1); Has 3403 Blast hits to 2554 proteins in 146 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 2; Plants - 3122; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).5-View
AT3G02380CONSTANS-like 2 CONSTANS-like 2 (COL2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of flower development; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT5G15840.1); Has 3185 Blast hits to 2478 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2995; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G07680No description available.A02-View
BR03G28890No description available.A03-View
BR01G34930No description available.A01-View
BR10G19340No description available.A10+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL07G17120No description available.Chr7+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G17640No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G41490Zinc finger protein CONSTANS-LIKE 2 (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G07030No description available.Gm13-View
GM19G05170No description available.Gm19-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G005920No description available.17-View
MD09G005600No description available.9-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04043G01430No description available.scaffold04043+View
ME06871G01030No description available.scaffold06871+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G01430similar to AT3G02380|COL2 (constans-like 2)ch3-1-View
TP6G28260similar to AT5G15850|COL1 (constans-like 1)ch6-6+View


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Gene id
Species
Description
Chromosome
Strand