Anchorpoints

Gene id
CRU_002G23010
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_001G20240No description available.scaffold_1+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G22920No description available.scaffold_1+View
AL2G26430No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G21690embryo defective 1968 (EMB1968); FUNCTIONS IN: in 6 functions; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), Replication factor C (InterPro:IPR013748); BEST Arabidopsis thaliana protein match is: replication factor C subunit 3 (TAIR:AT1G77470.1). ATPase family associated with various cellular activities (AAA)1+View
AT1G77470replication factor C subunit 3 Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent. replication factor C subunit 3 (RFC3); FUNCTIONS IN: in 6 functions; INVOLVED IN: negative regulation of defense response; LOCATED IN: DNA replication factor C complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), Replication factor C (InterPro:IPR013748), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921); BEST Arabidopsis thaliana protein match is: ATPase family associated with various cellular activities (AAA) (TAIR:AT1G21690.1); Has 17584 Blast hits to 17541 proteins in 2810 species: Archae - 637; Bacteria - 9895; Metazoa - 902; Fungi - 991; Plants - 392; Viruses - 88; Other Eukaryotes - 4679 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G24580No description available.A08-View
BR02G24290No description available.A02-View
BR06G15840No description available.A06+View
BR07G19240No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G05820No description available.Chr8+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM01598G00560No description available.CM3.5_scaffold01598+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00064G01090No description available.supercontig_64+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00004G00400No description available.scaffold00004+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G29880Replication factor C subunit 5 (RF-C 36 kDa subunit) (putative)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM04G42550No description available.Gm04+View
GM06G11980No description available.Gm06-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G24760No description available.Chr09+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G026680No description available.15+View
MD08G016460No description available.8+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04314G00060No description available.scaffold04314-View
ME07238G00510No description available.scaffold07238-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G088120replication factor C subunit 5chr3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G18000No description available.Chr05+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G060150Replication factor C subunit 3 (AHRD V1 ***- B6TFI5_MAIZE)%3B contains Interpro domain(s) IPR013748 Replication factor Cch06+View
SL11G012820Replication factor C subunit 2 (AHRD V1 ***- B6T4T0_MAIZE)%3B contains Interpro domain(s) IPR013748 Replication factor Cch11+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST06G017810Replication factor C subunit 3 (AHRD V1 ***- B6TFI5_MAIZE); contains Interpro domain(s) IPR013748 Replication factor Cchr06-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G12470No description available.scaffold_8+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G19230No description available.ch1-1+View
TP5G32630similar to AT1G77470|replication factor C 36 kDA, putativech5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G01780name=GSVIVG01008825001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM10G03020replication factor C subunit 210+View


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Gene id
Species
Description
Chromosome
Strand