Anchorpoints

Gene id
CRU_002G21710
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_001G19060No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G25000No description available.scaffold_2-View
AL1G21440No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G76120Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G20370.1); Has 3359 Blast hits to 3090 proteins in 1171 species: Archae - 124; Bacteria - 1897; Metazoa - 335; Fungi - 288; Plants - 173; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink). Pseudouridine synthase family protein1-View
AT1G20370Pseudouridine synthase family protein Pseudouridine synthase family protein; FUNCTIONS IN: pseudouridine synthase activity; INVOLVED IN: pseudouridine synthesis, RNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase I, TruA, N-terminal (InterPro:IPR020094), Pseudouridine synthase I, TruA, alpha/beta domain (InterPro:IPR020097), Pseudouridine synthase I, TruA, C-terminal (InterPro:IPR020095), Pseudouridine synthase I, TruA (InterPro:IPR001406); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1); Has 3883 Blast hits to 3550 proteins in 1359 species: Archae - 140; Bacteria - 2302; Metazoa - 346; Fungi - 312; Plants - 197; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink).1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00001G01760No description available.scaffold00001+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G31320No description available.A07-View
BR06G14700No description available.A06-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G16580No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G03820No description available.CM3.5_scaffold00029-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G02440No description available.supercontig_26+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G06170No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G13900No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G37760tRNA pseudouridine synthase 1 (probable)LG2+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02943G00690No description available.scaffold02943-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G36650No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G24700No description available.Chr05-View
PT02G01440No description available.Chr02+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G06270No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G082070tRNA pseudouridine synthase family protein (AHRD V1 *-** B6TLN6_MAIZE)%3B contains Interpro domain(s) IPR001406 Pseudouridine synthase I%2C TruAch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G035460tRNA pseudouridine synthase family protein (AHRD V1 **** E5GCD2_CUCME); contains Interpro domain(s) IPR001406 Pseudouridine synthase I, TruAchr04-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G18110similar to AT1G20370|tRNA pseudouridine synthase family proteinch1-1-View
TP5G31240similar to AT1G76120|tRNA pseudouridine synthase family proteinch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G00910name=GSVIVG01008716001;chr18+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G36080LOC100283773;LOC1002837735+View


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Gene id
Species
Description
Chromosome
Strand