Anchorpoints
- Gene id
- CRU_002G21340
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_001G18720 | No description available. | scaffold_1 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL2G24690 | No description available. | scaffold_2 | - | View |
AL1G21050 | No description available. | scaffold_1 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G20010 | beta tubulin tubulin beta-5 chain (TUB5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process; LOCATED IN: tubulin complex, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-1 chain (TAIR:AT1G75780.1); Has 23676 Blast hits to 23579 proteins in 4895 species: Archae - 37; Bacteria - 47; Metazoa - 4468; Fungi - 14216; Plants - 1551; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). tubulin beta-5 chain | 1 | - | View |
AT1G75780 | tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain (TUB1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to light stimulus, unidimensional cell growth; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-5 chain (TAIR:AT1G20010.1); Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 36; Bacteria - 42; Metazoa - 4470; Fungi - 14216; Plants - 1549; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink). | 1 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR09G19680 | No description available. | A09 | + | View |
BR07G31030 | No description available. | A07 | - | View |
BR01G11260 | No description available. | A01 | + | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV0G62030 | No description available. | Bvchr1_un.sca001 | - | View |
BV5G07470 | No description available. | Bvchr5.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL08G14020 | No description available. | Chr8 | + | View |
CL04G10540 | No description available. | Chr4 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00001G02250 | No description available. | CM3.5_scaffold00001 | + | View |
CM00014G03790 | No description available. | CM3.5_scaffold00014 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00026G00500 | No description available. | supercontig_26 | - | View |
CP00119G00500 | No description available. | supercontig_119 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00002G05560 | No description available. | scaffold00002 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0011G02380 | No description available. | scaffold_11 | + | View |
EG0006G13540 | No description available. | scaffold_6 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G16740 | Tubulin beta-4 chain | LG5 | - | View |
FV2G38470 | Tubulin beta-6 chain (similar to) | LG2 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM05G33830 | No description available. | Gm05 | - | View |
GM17G37770 | No description available. | Gm17 | - | View |
GM06G02650 | No description available. | Gm06 | + | View |
GM08G05850 | No description available. | Gm08 | + | View |
GM04G02610 | No description available. | Gm04 | + | View |
GM14G40380 | No description available. | Gm14 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR10G00380 | No description available. | Chr10 | + | View |
GR09G19450 | No description available. | Chr09 | + | View |
GR12G14700 | No description available. | Chr12 | - | View |
GR02G12340 | No description available. | Chr02 | + | View |
GR09G26980 | No description available. | Chr09 | + | View |
GR06G19190 | No description available. | Chr06 | - | View |
GR06G06990 | No description available. | Chr06 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G000850 | No description available. | 3 | + | View |
MD14G021890 | No description available. | 14 | + | View |
MD15G018000 | No description available. | 15 | - | View |
MD08G000880 | No description available. | 8 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME06631G00380 | No description available. | scaffold06631 | + | View |
ME07012G00470 | No description available. | scaffold07012 | + | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MT3G113970 | tubulin beta-1 chain | chr3 | - | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_001G37330 | No description available. | scaffold_1 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G02180 | No description available. | Chr02 | + | View |
PT05G23990 | No description available. | Chr05 | - | View |
Ricinus communis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
RC30170G05480 | No description available. | 30170 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G089310 | Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulin | ch12 | - | View |
SL04G081490 | Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulin | ch04 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST04G034870 | Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY); contains Interpro domain(s) IPR002453 Beta tubulin Tubulin beta-1 chain | chr04 | - | View |
ST12G027490 | Tubulin beta chain (AHRD V1 ***- B9GH00_POPTR); contains Interpro domain(s) IPR002453 Beta tubulin | chr12 | - | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0008G04330 | No description available. | scaffold_8 | - | View |
TC0003G05420 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP2G09180 | similar to AT5G44340|TUB4 | ch2-4 | - | View |
TP5G30900 | similar to AT1G75780|TUB1 | ch5-7 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G10640 | name=GSVIVG01009913001; | chr18 | - | View |