Anchorpoints

Gene id
CRU_002G21340
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_001G18720No description available.scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G24690No description available.scaffold_2-View
AL1G21050No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G20010beta tubulin tubulin beta-5 chain (TUB5); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process; LOCATED IN: tubulin complex, cell wall, plasma membrane, chloroplast, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-1 chain (TAIR:AT1G75780.1); Has 23676 Blast hits to 23579 proteins in 4895 species: Archae - 37; Bacteria - 47; Metazoa - 4468; Fungi - 14216; Plants - 1551; Viruses - 0; Other Eukaryotes - 3357 (source: NCBI BLink). tubulin beta-5 chain1-View
AT1G75780tubulin beta-1 chain beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses tubulin beta-1 chain (TUB1); FUNCTIONS IN: structural molecule activity, GTP binding, GTPase activity; INVOLVED IN: response to light stimulus, unidimensional cell growth; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin beta-5 chain (TAIR:AT1G20010.1); Has 23671 Blast hits to 23575 proteins in 4891 species: Archae - 36; Bacteria - 42; Metazoa - 4470; Fungi - 14216; Plants - 1549; Viruses - 0; Other Eukaryotes - 3358 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G19680No description available.A09+View
BR07G31030No description available.A07-View
BR01G11260No description available.A01+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV0G62030No description available.Bvchr1_un.sca001-View
BV5G07470No description available.Bvchr5.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL08G14020No description available.Chr8+View
CL04G10540No description available.Chr4-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G02250No description available.CM3.5_scaffold00001+View
CM00014G03790No description available.CM3.5_scaffold00014-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00026G00500No description available.supercontig_26-View
CP00119G00500No description available.supercontig_119+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00002G05560No description available.scaffold00002-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0011G02380No description available.scaffold_11+View
EG0006G13540No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G16740Tubulin beta-4 chainLG5-View
FV2G38470Tubulin beta-6 chain (similar to)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G33830No description available.Gm05-View
GM17G37770No description available.Gm17-View
GM06G02650No description available.Gm06+View
GM08G05850No description available.Gm08+View
GM04G02610No description available.Gm04+View
GM14G40380No description available.Gm14+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G00380No description available.Chr10+View
GR09G19450No description available.Chr09+View
GR12G14700No description available.Chr12-View
GR02G12340No description available.Chr02+View
GR09G26980No description available.Chr09+View
GR06G19190No description available.Chr06-View
GR06G06990No description available.Chr06-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G000850No description available.3+View
MD14G021890No description available.14+View
MD15G018000No description available.15-View
MD08G000880No description available.8+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06631G00380No description available.scaffold06631+View
ME07012G00470No description available.scaffold07012+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G113970tubulin beta-1 chainchr3-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G37330No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G02180No description available.Chr02+View
PT05G23990No description available.Chr05-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G05480No description available.30170-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G089310Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulinch12-View
SL04G081490Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY)%3B contains Interpro domain(s) IPR002453 Beta tubulinch04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G034870Tubulin beta-1 chain (AHRD V1 ***- D7KT68_ARALY); contains Interpro domain(s) IPR002453 Beta tubulin Tubulin beta-1 chainchr04-View
ST12G027490Tubulin beta chain (AHRD V1 ***- B9GH00_POPTR); contains Interpro domain(s) IPR002453 Beta tubulinchr12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G04330No description available.scaffold_8-View
TC0003G05420No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G09180similar to AT5G44340|TUB4ch2-4-View
TP5G30900similar to AT1G75780|TUB1ch5-7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G10640name=GSVIVG01009913001;chr18-View


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Gene id
Species
Description
Chromosome
Strand