Anchorpoints

Gene id
CRU_001G40210
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_003G14330No description available.scaffold_3+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G16250No description available.scaffold_3+View
AL1G48060No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G15355ubiquitin-conjugating enzyme 25 ubiquitin-conjugating enzyme 25 (UBC25); FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1); Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0; Bacteria - 0; Metazoa - 2619; Fungi - 1243; Plants - 1332; Viruses - 17; Other Eukaryotes - 957 (source: NCBI BLink).3+View
AT1G53023Ubiquitin-conjugating enzyme family protein Ubiquitin-conjugating enzyme family protein; FUNCTIONS IN: small conjugating protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1).1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00068G01430No description available.scaffold00068+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G27690No description available.A05-View
BR08G01580No description available.A08+View
BR05G17050No description available.A05+View
BR06G01420No description available.A06+View
BR01G33370No description available.A01-View
BR03G34360No description available.A03+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL11G12030No description available.Chr11+View
CL01G23110No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00029G00740No description available.CM3.5_scaffold00029+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00080G00590No description available.supercontig_80-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00047G00100No description available.scaffold00047-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G04960No description available.scaffold_4+View
EG0006G09040No description available.scaffold_6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G31630No description available.Gm07-View
GM06G37361No description available.Gm06+View
GM12G24486No description available.Gm12-View
GM13G31290No description available.Gm13+View
GM12G35270No description available.Gm12-View
GM13G35250No description available.Gm13+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G02790No description available.Chr11-View
GR02G07020No description available.Chr02+View
GR10G15340No description available.Chr10-View
GR07G32250No description available.Chr07-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G022350No description available.11-View
MD10G005730No description available.10+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07894G00050No description available.scaffold07894-View
ME04851G00050No description available.scaffold04851-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G079270ubiquitin-conjugating enzymechr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G17410No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G13080No description available.Chr13+View
PT11G11880No description available.Chr11-View
PT01G40030No description available.Chr01+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29983G00850No description available.29983+View
RC29616G00090No description available.29616-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G013820Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch12-View
SL10G007000Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch10-View
SL07G053960Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch07+View
SL02G078210Ubiquitin-conjugating enzyme 22 (AHRD V1 ***- D7L888_ARALY)%3B contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme%2C E2ch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST10G007220Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2chr10-View
ST12G005600Ubiquitin-conjugating enzyme 23 (AHRD V1 *-*- D7L425_ARALY); contains Interpro domain(s) IPR000608 Ubiquitin-conjugating enzyme, E2chr12+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0006G18310No description available.scaffold_6+View
TC0007G08280No description available.scaffold_7-View
TC0002G17510No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G13590similar to AT3G15355|UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)ch3-1+View
TP1G39580similar to AT1G53020|0ch1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02980name=GSVIVG01014343001;chr19+View


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Gene id
Species
Description
Chromosome
Strand