Anchorpoints

Gene id
CRU_001G40090
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G47920No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G65850Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G38340.1). Disease resistance protein (TIR-NBS-LRR class) family1+View
AT1G52900Toll-Interleukin-Resistance (TIR) domain family protein Toll-Interleukin-Resistance (TIR) domain family protein; FUNCTIONS IN: transmembrane receptor activity; INVOLVED IN: signal transduction, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Toll-Interleukin-Resistance (TIR) domain family protein (TAIR:AT1G61105.1); Has 1472 Blast hits to 1437 proteins in 74 species: Archae - 2; Bacteria - 52; Metazoa - 24; Fungi - 0; Plants - 1393; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).1-View
AT3G04210Disease resistance protein (TIR-NBS class) Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G38340.1); Has 7287 Blast hits to 7131 proteins in 234 species: Archae - 2; Bacteria - 61; Metazoa - 8; Fungi - 0; Plants - 7211; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G01500No description available.A06+View
BR08G01630No description available.A08+View
BR05G17060No description available.A05+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00001G06820No description available.CM3.5_scaffold00001-View
CM00028G01220No description available.CM3.5_scaffold00028+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00080G00920No description available.supercontig_80+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00012G00300No description available.scaffold00012+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0004G05340No description available.scaffold_4+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G45950TMV resistance protein N (probable)LG2+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G35530No description available.Gm13+View
GM07G31240No description available.Gm07-View
GM12G35010No description available.Gm12-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR11G02520No description available.Chr11-View
GR09G43360No description available.Chr09-View
GR02G07130No description available.Chr02+View
GR07G31850No description available.Chr07-View
GR10G15150No description available.Chr10-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G021770No description available.11-View
MD09G023660No description available.9+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03741G01210No description available.scaffold03741+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT2G079900toll-interleukin-resistance (TIR) domain proteinchr2+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_004G17850No description available.scaffold_4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G40380No description available.Chr01+View
PT11G12310No description available.Chr11+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G063360Tir%2C resistance protein fragmentch07+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST07G023830Tir-nbs-lrr resistance protein (Fragment) (AHRD V1 ***- B9INY7_POPTR); contains Interpro domain(s) IPR000157 Toll-Interleukin receptorchr07-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0007G07130No description available.scaffold_7-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G39470similar to AT1G52900|disease resistance protein (TIR class), putativech1-2-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G03370name=GSVIVG01014397001;chr19+View


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Description
Chromosome
Strand