Anchorpoints

Gene id
CRU_001G24090
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_002G14080No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G16620No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G25410isopentenyltransferase 6 AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cds isopentenyltransferase 6 (IPT6); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 1 (TAIR:AT1G68460.1); Has 7248 Blast hits to 7187 proteins in 2504 species: Archae - 0; Bacteria - 4974; Metazoa - 135; Fungi - 135; Plants - 290; Viruses - 0; Other Eukaryotes - 1714 (source: NCBI BLink).1-View
AT1G68460isopentenyltransferase 1 isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink). Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00079G00450No description available.scaffold00079-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G19120No description available.A02-View
BR07G22770No description available.A07+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL05G23720No description available.Chr5-View
CL08G02440No description available.Chr8-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00016G05910No description available.CM3.5_scaffold00016+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00008G00740No description available.scaffold00008-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G17590No description available.scaffold_7-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G01490tRNA Delta(2)-isopentenylpyrophosphate transferase (IPP transferase) (probable)scf0513158-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM20G25041No description available.Gm20+View
GM10G41990No description available.Gm10-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR12G12270No description available.Chr12+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G002630No description available.13-View
MD16G001560No description available.16-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03604G00680No description available.scaffold03604-View
ME08359G00010No description available.scaffold08359-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G407170adenylate isopentenyltransferasechr7-View
MT1G110590adenylate isopentenyltransferasechr1-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G32200No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G12150No description available.Chr08+View
PT10G12390No description available.Chr10-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G007240tRNA dimethylallyltransferase (AHRD V1 **** D6W2X4_YEAST)%3B contains Interpro domain(s) IPR002627 tRNA isopentenyltransferasech04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G22700No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G23530similar to AT1G68460|ATIPT1 (isopentenyltransferase 1)ch5-6-View
TP1G22810similar to AT1G25410|ATIPT6ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G07650name=GSVIVG01011886001;chr1+View


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Gene id
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Description
Chromosome
Strand