Anchorpoints

Gene id
CRU_001G23390
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_005G07250No description available.scaffold_5-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G26960No description available.scaffold_1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G26670member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles. VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). Vesicle transport v-SNARE family protein1+View
AT3G29100vesicle transport V-snare 13 (VTI13); FUNCTIONS IN: SNARE binding, receptor activity; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 695 Blast hits to 693 proteins in 200 species: Archae - 2; Bacteria - 0; Metazoa - 259; Fungi - 142; Plants - 163; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). vesicle transport V-snare 13 Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated.3-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR07G08260No description available.A07+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G02100No description available.Bvchr6.sca028+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G18490No description available.Chr9+View
CL10G13380No description available.Chr10+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00051G00520No description available.CM3.5_scaffold00051-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00001G00630No description available.supercontig_1-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00015G02020No description available.scaffold00015-View
CS00003G04760No description available.scaffold00003-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G04640No description available.scaffold_2-View
EG0002G26290No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G12820Vesicle transport v-SNARE 13 (AtVTI13) (putative)LG5+View
FV6G43850Vesicle transport v-SNARE 13 (AtVTI13) (putative)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G03090No description available.Gm19-View
GM06G21130No description available.Gm06-View
GM01G06320No description available.Gm01-View
GM02G12390No description available.Gm02-View
GM09G36941No description available.Gm09+View
GM13G05680No description available.Gm13-View
GM04G33095No description available.Gm04+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G17920No description available.Chr08+View
GR12G05180No description available.Chr12+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G004500No description available.17-View
MD16G003440No description available.16+View
MD14G019460No description available.14-View
MD06G016030No description available.6-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03079G00240No description available.scaffold03079-View
ME08359G02050No description available.scaffold08359+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G042530vesicle transport V-SNARE protein amine-terminal proteinchr5-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_003G24270No description available.scaffold_3+View
PPE_001G29100No description available.scaffold_1-View
PPE_005G20210No description available.scaffold_5-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G08770No description available.Chr17-View
PT10G16430No description available.Chr10+View
PT08G09100No description available.Chr08-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G02100No description available.30138+View
RC29813G00880No description available.29813-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G013050Vesicle transport v-SNARE 11-like (AHRD V1 ***- Q307Y3_SOLTU)%3B contains Interpro domain(s) IPR007705 Vesicle transport v-SNAREch05+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0004G09140No description available.scaffold_4-View
TC0002G33840No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G22140similar to AT1G26670|VTI1Bch1-1-View
TP5G24520similar to AT1G26670|VTI1Bch5-6+View
TP2G17740similar to AT3G29100|VTI13ch2-4-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G10970name=GSVIVG01012494001;chr1+View
VV17G03340name=GSVIVG01007964001;chr17-View
VV14G02580name=GSVIVG01011463001;chr14-View


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Gene id
Species
Description
Chromosome
Strand