Anchorpoints
- Gene id
- CRU_001G11610
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_007G14740 | No description available. | scaffold_7 | - | View |
CRU_002G01920 | No description available. | scaffold_2 | - | View |
CRU_008G11580 | No description available. | scaffold_8 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL8G16010 | No description available. | scaffold_8 | + | View |
AL7G16710 | No description available. | scaffold_7 | - | View |
AL2G02410 | No description available. | scaffold_2 | - | View |
AL1G12910 | No description available. | scaffold_1 | + | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G62975 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12540.1); Has 533 Blast hits to 533 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 0; Plants - 445; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 1 | + | View |
AT4G25400 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51780.1); Has 180 Blast hits to 180 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 4 | + | View |
AT5G51780 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25400.1); Has 292 Blast hits to 292 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 290; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 5 | + | View |
AT1G12540 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G62975.1); Has 394 Blast hits to 394 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 387; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR03G48510 | No description available. | A03 | + | View |
BR02G16680 | No description available. | A02 | - | View |
BR01G27510 | No description available. | A01 | - | View |
BR08G17700 | No description available. | A08 | - | View |
BR06G08420 | No description available. | A06 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV5G08440 | No description available. | Bvchr5.sca002 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL01G03110 | No description available. | Chr1 | - | View |
CL05G08730 | No description available. | Chr5 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00006G09680 | No description available. | CM3.5_scaffold00006 | + | View |
CM00005G05800 | No description available. | CM3.5_scaffold00005 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00040G00570 | No description available. | scaffold00040 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0001G24300 | No description available. | scaffold_1 | - | View |
EG0004G15830 | No description available. | scaffold_4 | - | View |
EG0005G04590 | No description available. | scaffold_5 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV5G01380 | Transcription factor bHLH120 (bHLH 120) (probable) | LG5 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM09G27610 | No description available. | Gm09 | - | View |
GM16G32610 | No description available. | Gm16 | - | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR08G28230 | No description available. | Chr08 | - | View |
GR06G19650 | No description available. | Chr06 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME00341G01390 | No description available. | scaffold00341 | - | View |
ME01127G01010 | No description available. | scaffold01127 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_005G09500 | No description available. | scaffold_5 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G11340 | No description available. | Chr01 | - | View |
PT15G13430 | No description available. | Chr15 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL06G035490 | BHLH transcription factor-like (AHRD V1 *-** Q941Z7_ORYSJ)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding | ch06 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0003G26360 | No description available. | scaffold_3 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP6G14000 | similar to AT5G51790|basix helix-loop-helix (bHLH) family protein | ch6-6 | + | View |
TP7G23420 | similar to AT4G25400|basix helix-loop-helix (bHLH) family protein | ch7-4 | + | View |
TP2G01630 | similar to AT1G62975|basic helix-loop-helix (bHLH) family protein (bHLH125) | ch2-1 | - | View |
TP1G11120 | similar to AT1G12540|basic helix-loop-helix (bHLH) family protein | ch1-1 | + | View |