Anchorpoints

Gene id
CRU_001G11610
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_007G14740No description available.scaffold_7-View
CRU_002G01920No description available.scaffold_2-View
CRU_008G11580No description available.scaffold_8+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G16010No description available.scaffold_8+View
AL7G16710No description available.scaffold_7-View
AL2G02410No description available.scaffold_2-View
AL1G12910No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G62975basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12540.1); Has 533 Blast hits to 533 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 85; Fungi - 0; Plants - 445; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).1+View
AT4G25400basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G51780.1); Has 180 Blast hits to 180 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein4+View
AT5G51780basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G25400.1); Has 292 Blast hits to 292 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 290; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5+View
AT1G12540basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G62975.1); Has 394 Blast hits to 394 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 2; Plants - 387; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). basic helix-loop-helix (bHLH) DNA-binding superfamily protein1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR03G48510No description available.A03+View
BR02G16680No description available.A02-View
BR01G27510No description available.A01-View
BR08G17700No description available.A08-View
BR06G08420No description available.A06-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV5G08440No description available.Bvchr5.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G03110No description available.Chr1-View
CL05G08730No description available.Chr5+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00006G09680No description available.CM3.5_scaffold00006+View
CM00005G05800No description available.CM3.5_scaffold00005+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00040G00570No description available.scaffold00040-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0001G24300No description available.scaffold_1-View
EG0004G15830No description available.scaffold_4-View
EG0005G04590No description available.scaffold_5+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G01380Transcription factor bHLH120 (bHLH 120) (probable)LG5+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM09G27610No description available.Gm09-View
GM16G32610No description available.Gm16-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR08G28230No description available.Chr08-View
GR06G19650No description available.Chr06+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00341G01390No description available.scaffold00341-View
ME01127G01010No description available.scaffold01127+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_005G09500No description available.scaffold_5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G11340No description available.Chr01-View
PT15G13430No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G035490BHLH transcription factor-like (AHRD V1 *-** Q941Z7_ORYSJ)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-bindingch06+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0003G26360No description available.scaffold_3+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G14000similar to AT5G51790|basix helix-loop-helix (bHLH) family proteinch6-6+View
TP7G23420similar to AT4G25400|basix helix-loop-helix (bHLH) family proteinch7-4+View
TP2G01630similar to AT1G62975|basic helix-loop-helix (bHLH) family protein (bHLH125)ch2-1-View
TP1G11120similar to AT1G12540|basic helix-loop-helix (bHLH) family proteinch1-1+View


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Gene id
Species
Description
Chromosome
Strand