Anchorpoints

Gene id
CRU_001G09920
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_002G04230No description available.scaffold_2-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G11030No description available.scaffold_1-View
AL2G05130No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G60860ARF-GAP domain 2 (AGD2); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 4 (TAIR:AT1G10870.1); Has 22643 Blast hits to 15173 proteins in 641 species: Archae - 75; Bacteria - 1664; Metazoa - 11505; Fungi - 2316; Plants - 1355; Viruses - 192; Other Eukaryotes - 5536 (source: NCBI BLink). A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD2 belongs to the class 1, together with AGD1, AGD3, and AGD4. ARF-GAP domain 21-View
AT1G10870ARF-GAP domain 4 A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3. ARF-GAP domain 4 (AGD4); FUNCTIONS IN: ARF GTPase activator activity, zinc ion binding; INVOLVED IN: regulation of ARF GTPase activity; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), Pleckstrin homology-type (InterPro:IPR011993), Ankyrin repeat-containing domain (InterPro:IPR020683), BAR (InterPro:IPR004148), Pleckstrin homology (InterPro:IPR001849), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 2 (TAIR:AT1G60860.1); Has 23403 Blast hits to 15248 proteins in 655 species: Archae - 77; Bacteria - 1735; Metazoa - 12296; Fungi - 2244; Plants - 1395; Viruses - 252; Other Eukaryotes - 5404 (source: NCBI BLink).1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G14380No description available.A09+View
BR06G07190No description available.A06-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP2G03810similar to AT1G60860|AGD2 (ARF-GAP DOMAIN 2)ch2-2+View
TP1G09570similar to AT1G10870|AGD4 (ARF-GAP domain 4)ch1-1-View


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Gene id
Species
Description
Chromosome
Strand