Anchorpoints

Gene id
CRU_001G08920
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_002G05950No description available.scaffold_2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G09720No description available.scaffold_1-View
AL2G07820No description available.scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G58290HEMA1; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: chlorophyll biosynthetic process, heme biosynthetic process, response to light stimulus, porphyrin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 5070 Blast hits to 5064 proteins in 1817 species: Archae - 226; Bacteria - 3676; Metazoa - 1; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 940 (source: NCBI BLink). Glutamyl-tRNA reductase family protein Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.1-View
AT1G09940Glutamyl-tRNA reductase family protein HEMA2; FUNCTIONS IN: glutamyl-tRNA reductase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process, porphyrin biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G58290.1); Has 5044 Blast hits to 5020 proteins in 1819 species: Archae - 226; Bacteria - 3662; Metazoa - 1; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 934 (source: NCBI BLink). Encodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins1-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR01G24650No description available.A01-View
BR09G15420No description available.A09+View
BR09G50960No description available.A09+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL09G15040No description available.Chr9+View
CL08G11680No description available.Chr8-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00014G04770No description available.CM3.5_scaffold00014-View
CM00034G01830No description available.CM3.5_scaffold00034-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G17700No description available.scaffold_6-View
EG0006G04020No description available.scaffold_6-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV5G23990Glutamyl-tRNA reductase 1, chloroplastic (GluTR), Precursor (putative)LG5-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM07G30350No description available.Gm07-View
GM06G09630No description available.Gm06+View
GM02G38280No description available.Gm02-View
GM08G06900No description available.Gm08+View
GM14G36420No description available.Gm14-View
GM04G09520No description available.Gm04+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR09G22590No description available.Chr09+View
GR02G13780No description available.Chr02+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G006840No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD15G031000No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04260G00070No description available.scaffold04260-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G067410glutamyl-tRNA reductasechr5-View
MT3G111190glutamyl-tRNA reductase family proteinchr3+View
MT4G092820glutamyl-tRNA reductase family proteinchr4+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G57480No description available.scaffold_1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G28640No description available.Chr01-View
PT02G10780No description available.Chr02+View
PT09G08060No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30170G00030No description available.30170-View
RC29804G00390No description available.29804+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G106390Glutamyl-tRNA reductase (AHRD V1 ***- A5BZY3_VITVI)%3B contains Interpro domain(s) IPR000343 Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductasech01-View
SL04G076870Glutamyl-tRNA reductase (AHRD V1 **** A5BZY3_VITVI)%3B contains Interpro domain(s) IPR000343 Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductasech04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST01G043580Glutamyl-tRNA reductase (AHRD V1 ***- A5BZY3_VITVI); contains Interpro domain(s) IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductasechr01-View
ST04G028730Glutamyl-tRNA reductase (AHRD V1 ***- A5BZY3_VITVI); contains Interpro domain(s) IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductasechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G07480No description available.scaffold_8-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G08600similar to AT1G09940|HEMA2ch1-1-View
TP2G05310similar to AT1G58290|HEMA1ch2-2+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G05100name=GSVIVG01009241001;chr18-View


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Gene id
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Description
Chromosome
Strand