Anchorpoints

Gene id
CRU_001G06850
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G07530No description available.scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G07910RNAligase (RNL); CONTAINS InterPro DOMAIN/s: tRNA ligase, phosphodiesterase, fungi (InterPro:IPR015965); Has 209 Blast hits to 196 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 200; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). RNAligase Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains ? an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component? that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.1+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G51860No description available.A09-View
BR06G04750No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G02370No description available.Chr3-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00004G03840No description available.CM3.5_scaffold00004+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00139G00650No description available.supercontig_139+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01790No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19840No description available.scaffold_2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G008380No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00650No description available.scaffold03750+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G060795RNA ligase C putativechr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G09350No description available.scaffold_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL11G072420RNA ligase isoform 2 (Fragment) (AHRD V1 **-* Q0WZC1_WHEAT)ch11-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST11G029180RNA ligase isoform 3 (Fragment) (AHRD V1 **-* Q0WZC0_WHEAT)chr11-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G06590similar to AT1G07910|RNL (RNA LIGASE)ch1-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04930name=GSVIVG01025133001;chr6-View


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Gene id
Species
Description
Chromosome
Strand