Anchorpoints
- Gene id
- CRU_001G06440
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_004G09850 | No description available. | scaffold_4 | - | View |
CRU_004G10220 | No description available. | scaffold_4 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G07120 | No description available. | scaffold_1 | + | View |
AL4G13590 | No description available. | scaffold_4 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G07510 | FTSH protease 10 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink). | 1 | + | View |
AT2G29080 | FTSH protease 3 FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). encodes an FtsH protease that is localized to the mitochondrion | 2 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR05G06120 | No description available. | A05 | - | View |
BR07G13660 | No description available. | A07 | + | View |
BR09G52070 | No description available. | A09 | - | View |
BR04G17000 | No description available. | A04 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BV7G06280 | No description available. | Bvchr7.sca021 | + | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CL04G07950 | No description available. | Chr4 | + | View |
CL02G20240 | No description available. | Chr2 | + | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CM00002G00750 | No description available. | CM3.5_scaffold00002 | - | View |
CM00084G00590 | No description available. | CM3.5_scaffold00084 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00081G01230 | No description available. | supercontig_81 | + | View |
Citrus sinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CS00014G00200 | No description available. | scaffold00014 | + | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0002G18530 | No description available. | scaffold_2 | + | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FV6G12790 | Cell division protease ftsH homolog 10, mitochondrial (AtFtsH10), Precursor (putative) | LG6 | + | View |
FV3G21920 | Cell division protease ftsH homolog 9, chloroplastic (AtFtsH9), Precursor (putative) | LG3 | + | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GM18G40575 | No description available. | Gm18 | + | View |
GM12G06530 | No description available. | Gm12 | + | View |
GM03G42370 | No description available. | Gm03 | - | View |
GM11G14640 | No description available. | Gm11 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G17180 | No description available. | Chr06 | + | View |
GR09G09790 | No description available. | Chr09 | + | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G045210 | No description available. | chr3 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD03G006480 | No description available. | 3 | + | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ME07991G00750 | No description available. | scaffold07991 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS05G38400 | OsFtsH8 FtsH protease, homologue of AtFtsH3%2F10, expressed ATP-dependent zinc metalloprotease FTSH 8, mitochondrial | 5 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PPE_006G07160 | No description available. | scaffold_6 | + | View |
PPE_006G26500 | No description available. | scaffold_6 | - | View |
PPE_006G00580 | No description available. | scaffold_6 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT16G09980 | No description available. | Chr16 | - | View |
PT06G07900 | No description available. | Chr06 | + | View |
PT09G03360 | No description available. | Chr09 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G010950 | Cell division protease ftsH homolog (AHRD V1 **-- FTSH_BACSU)%3B contains Interpro domain(s) IPR005936 Peptidase M41%2C FtsH | ch09 | - | View |
SL10G086540 | Cell division protease ftsH homolog (AHRD V1 **-- FTSH_BACSU)%3B contains Interpro domain(s) IPR005936 Peptidase M41%2C FtsH | ch10 | - | View |
Solanum tuberosum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ST09G009050 | ATP-dependent zinc metalloprotease FtsH (AHRD V1 ***- C2G104_9SPHI); contains Interpro domain(s) IPR005936 Peptidase M41, FtsH | chr09 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TC0009G31300 | No description available. | scaffold_9 | + | View |
TC0005G03560 | No description available. | scaffold_5 | + | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G06240 | similar to AT1G07510|ftsh10 (FtsH protease 10) | ch1-1 | + | View |
TP4G11900 | similar to AT2G29080|ftsh3 (FtsH protease 3) | ch4-6 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV06G03290 | name=GSVIVG01024927001; | chr6 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM01G43640 | No description available. | 1 | - | View |
ZM08G17530 | No description available. | 8 | + | View |