Anchorpoints

Gene id
CRU_001G06440
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_004G09850No description available.scaffold_4-View
CRU_004G10220No description available.scaffold_4+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G07120No description available.scaffold_1+View
AL4G13590No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G07510FTSH protease 10 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10 (ftsh10); FUNCTIONS IN: in 6 functions; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane, plastid; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 3 (TAIR:AT2G29080.1); Has 37747 Blast hits to 35440 proteins in 3262 species: Archae - 1533; Bacteria - 14237; Metazoa - 4767; Fungi - 3643; Plants - 3223; Viruses - 27; Other Eukaryotes - 10317 (source: NCBI BLink).1+View
AT2G29080FTSH protease 3 FTSH protease 3 (ftsh3); FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity; INVOLVED IN: proteolysis, protein catabolic process; LOCATED IN: mitochondrion, chloroplast thylakoid membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH (InterPro:IPR005936), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Peptidase M41 (InterPro:IPR000642), Peptidase M41, FtsH extracellular (InterPro:IPR011546); BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1); Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581; Bacteria - 17420; Metazoa - 4814; Fungi - 3774; Plants - 3280; Viruses - 30; Other Eukaryotes - 11169 (source: NCBI BLink). encodes an FtsH protease that is localized to the mitochondrion2-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR05G06120No description available.A05-View
BR07G13660No description available.A07+View
BR09G52070No description available.A09-View
BR04G17000No description available.A04-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV7G06280No description available.Bvchr7.sca021+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL04G07950No description available.Chr4+View
CL02G20240No description available.Chr2+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00002G00750No description available.CM3.5_scaffold00002-View
CM00084G00590No description available.CM3.5_scaffold00084-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G01230No description available.supercontig_81+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G00200No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G18530No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G12790Cell division protease ftsH homolog 10, mitochondrial (AtFtsH10), Precursor (putative)LG6+View
FV3G21920Cell division protease ftsH homolog 9, chloroplastic (AtFtsH9), Precursor (putative)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G40575No description available.Gm18+View
GM12G06530No description available.Gm12+View
GM03G42370No description available.Gm03-View
GM11G14640No description available.Gm11+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G17180No description available.Chr06+View
GR09G09790No description available.Chr09+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G045210No description available.chr3-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G006480No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07991G00750No description available.scaffold07991-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G38400OsFtsH8 FtsH protease, homologue of AtFtsH3%2F10, expressed ATP-dependent zinc metalloprotease FTSH 8, mitochondrial5+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G07160No description available.scaffold_6+View
PPE_006G26500No description available.scaffold_6-View
PPE_006G00580No description available.scaffold_6-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G09980No description available.Chr16-View
PT06G07900No description available.Chr06+View
PT09G03360No description available.Chr09-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G010950Cell division protease ftsH homolog (AHRD V1 **-- FTSH_BACSU)%3B contains Interpro domain(s) IPR005936 Peptidase M41%2C FtsHch09-View
SL10G086540Cell division protease ftsH homolog (AHRD V1 **-- FTSH_BACSU)%3B contains Interpro domain(s) IPR005936 Peptidase M41%2C FtsHch10-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST09G009050ATP-dependent zinc metalloprotease FtsH (AHRD V1 ***- C2G104_9SPHI); contains Interpro domain(s) IPR005936 Peptidase M41, FtsHchr09+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G31300No description available.scaffold_9+View
TC0005G03560No description available.scaffold_5+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G06240similar to AT1G07510|ftsh10 (FtsH protease 10)ch1-1+View
TP4G11900similar to AT2G29080|ftsh3 (FtsH protease 3)ch4-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G03290name=GSVIVG01024927001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G43640No description available.1-View
ZM08G17530No description available.8+View


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Gene id
Species
Description
Chromosome
Strand