Anchorpoints
- Gene id
- CRU_001G04890
- Organism
- Capsella rubella
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CRU_002G10900 | No description available. | scaffold_2 | - | View |
CRU_004G25090 | No description available. | scaffold_4 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL1G05370 | No description available. | scaffold_1 | - | View |
AL4G31080 | No description available. | scaffold_4 | - | View |
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G43570 | 'chitinase, putative' (CHI); FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35; Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes - 124 (source: NCBI BLink). chitinase, putative | 2 | - | View |
AT1G05850 | Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). Chitinase family protein | 1 | - | View |
Amborella trichopoda
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ATR_00066G02660 | No description available. | scaffold00066 | - | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BR08G30770 | No description available. | A08 | + | View |
BR10G01940 | No description available. | A10 | + | View |
BR03G21580 | No description available. | A03 | - | View |
BR04G26090 | No description available. | A04 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
EG0008G02870 | No description available. | scaffold_8 | + | View |
EG0008G03980 | No description available. | scaffold_8 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GR06G23030 | No description available. | Chr06 | - | View |
Lotus japonicus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
LJ3G046070 | No description available. | chr3 | - | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MD04G000960 | No description available. | 4 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G39330 | CHIT1 - Chitinase family protein precursor, expressed Chitinase 6 | 2 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT14G14660 | No description available. | Chr14 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL09G098540 | Chitinase-like protein (AHRD V1 ***- Q6JX03_GOSHI)%3B contains Interpro domain(s) IPR000726 Glycoside hydrolase%2C family 19%2C catalytic | ch09 | - | View |
Thellungiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TP1G04670 | similar to AT1G05850|POM1 (POM-POM1) | ch1-1 | - | View |
TP4G25640 | similar to AT2G43590|chitinase, putative | ch4-6 | - | View |