Anchorpoints

Gene id
CRU_001G04890
Organism
Capsella rubella

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CRU_002G10900No description available.scaffold_2-View
CRU_004G25090No description available.scaffold_4-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G05370No description available.scaffold_1-View
AL4G31080No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G43570'chitinase, putative' (CHI); FUNCTIONS IN: chitin binding, chitinase activity; INVOLVED IN: carbohydrate metabolic process, cell wall macromolecule catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site (InterPro:IPR018371), Glycoside hydrolase, family 19 (InterPro:IPR016283), Chitin-binding, type 1 (InterPro:IPR001002), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1); Has 2763 Blast hits to 2517 proteins in 507 species: Archae - 0; Bacteria - 569; Metazoa - 35; Fungi - 239; Plants - 1787; Viruses - 9; Other Eukaryotes - 124 (source: NCBI BLink). chitinase, putative2-View
AT1G05850Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants. POM-POM1 (POM1); FUNCTIONS IN: chitinase activity; INVOLVED IN: in 9 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 19 (InterPro:IPR016283), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726); BEST Arabidopsis thaliana protein match is: chitinase-like protein 2 (TAIR:AT3G16920.1); Has 1965 Blast hits to 1960 proteins in 417 species: Archae - 0; Bacteria - 470; Metazoa - 35; Fungi - 5; Plants - 1415; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). Chitinase family protein1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00066G02660No description available.scaffold00066-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR08G30770No description available.A08+View
BR10G01940No description available.A10+View
BR03G21580No description available.A03-View
BR04G26090No description available.A04-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0008G02870No description available.scaffold_8+View
EG0008G03980No description available.scaffold_8+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR06G23030No description available.Chr06-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ3G046070No description available.chr3-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G000960No description available.4+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G39330CHIT1 - Chitinase family protein precursor, expressed Chitinase 62-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G14660No description available.Chr14-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G098540Chitinase-like protein (AHRD V1 ***- Q6JX03_GOSHI)%3B contains Interpro domain(s) IPR000726 Glycoside hydrolase%2C family 19%2C catalyticch09-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP1G04670similar to AT1G05850|POM1 (POM-POM1)ch1-1-View
TP4G25640similar to AT2G43590|chitinase, putativech4-6-View


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Gene id
Species
Description
Chromosome
Strand