PLAZA 3.0 Dicots : colinear gene pairs

Anchorpoints

Gene id: CRU_001G00030
Organism: Capsella rubella

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id	Description	Chromosome	Strand	Multiplicon
AL1G00070	No description available.	scaffold_1	-	View

Arabidopsis thaliana

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G02150	Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein	1	+	View

Brassica rapa

Gene id	Description	Chromosome	Strand	Multiplicon
BR10G06610	No description available.	A10	+	View

Citrus sinensis

Gene id	Description	Chromosome	Strand	Multiplicon
CS00001G00530	No description available.	scaffold00001	-	View

Ricinus communis

Gene id	Description	Chromosome	Strand	Multiplicon
RC29709G00090	No description available.	29709	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL01G089870	Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KP29_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat	ch01	-	View

Solanum tuberosum

Gene id	Description	Chromosome	Strand	Multiplicon
ST01G029110	Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KP29_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat	chr01	-	View

Theobroma cacao

Gene id	Description	Chromosome	Strand	Multiplicon
TC0001G39330	No description available.	scaffold_1	+	View

Thellungiella parvula

Gene id	Description	Chromosome	Strand	Multiplicon
TP1G00100	similar to AT1G02150\|pentatricopeptide (PPR) repeat-containing protein	ch1-1	-	View