Anchorpoints

Gene id
CP00139G00750
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G13430No description available.scaffold_5-View
AL8G26610No description available.scaffold_8+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G60410Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain5+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR02G11620No description available.A02-View
BR06G18930No description available.A06+View
BR10G13020No description available.A10+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV9G12230No description available.Bvchr9.sca013-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL03G02350No description available.Chr3-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_008G20510No description available.scaffold_8+View
CRU_005G10500No description available.scaffold_5-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00014G01890No description available.scaffold00014+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0002G19870No description available.scaffold_2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G44920E3 SUMO-protein ligase SIZ1 (putative)scf0513126-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G15880No description available.Gm11+View
GM13G40325No description available.Gm13-View
GM12G07590No description available.Gm12-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G008510No description available.3+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03750G00760No description available.scaffold03750+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G060510E3 SUMO-protein ligase SIZ1chr4-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G09580No description available.scaffold_6+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30111G00310No description available.30111+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G25520No description available.scaffold_9-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP6G22000similar to AT5G60410|SIZ1ch6-6+View
TP5G16000similar to AT5G60410|SIZ1ch5-1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G05070name=GSVIVG01025151001;chr6-View


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Gene id
Species
Description
Chromosome
Strand