Anchorpoints

Gene id
CP00040G00310
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G36010No description available.scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G20030RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28890.1); Has 9596 Blast hits to 9571 proteins in 288 species: Archae - 0; Bacteria - 6; Metazoa - 2467; Fungi - 781; Plants - 5028; Viruses - 54; Other Eukaryotes - 1260 (source: NCBI BLink). RING/U-box superfamily protein2+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00056G00130No description available.scaffold00056-View
ATR_00019G03500No description available.scaffold00019+View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV8G05100No description available.Bvchr8.sca018-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_003G33000No description available.scaffold_3+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00027G00260No description available.scaffold00027-View
CS00005G00920No description available.scaffold00005-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0003G29340No description available.scaffold_3+View
EG0003G08370No description available.scaffold_3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G35220RING-H2 finger protein ATL4J, Precursor (probable)scf0513146-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G08930No description available.Gm06-View
GM01G34830No description available.Gm01+View
GM09G32670No description available.Gm09+View
GM04G08847No description available.Gm04-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR10G07480No description available.Chr10-View
GR01G00770No description available.Chr01-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G005330No description available.2-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME09501G00610No description available.scaffold09501+View
ME00847G00690No description available.scaffold00847+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G110190RING-H2 finger protein ATL4Jchr3-View
MT6G087150RING-H2 finger protein ATL4Jchr6+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_007G24350No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G04240No description available.Chr18-View
PT06G23950No description available.Chr06+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL05G018310Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech05-View
SL12G007320Ring H2 finger protein (AHRD V1 *-*- D9ZHD8_HYPPE)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech12-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST12G009440E3 ubiquitin-protein ligase Os04g0590900 (AHRD V1 *-** ATL41_ORYSJ); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr12-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0009G04120No description available.scaffold_9-View
TC0009G09960No description available.scaffold_9+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP3G33350similar to AT2G20030|zinc finger (C3HC4-type RING finger) family proteinch3-6+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G04720name=GSVIVG01015336001;chr11+View


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Gene id
Species
Description
Chromosome
Strand