Anchorpoints

Gene id
CP00006G01180
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G39410No description available.scaffold_3-View
AL5G20490No description available.scaffold_5+View
AL2G24110No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G18350homeobox protein 24 homeobox protein 24 (HB24); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 28 (TAIR:AT3G50890.1); Has 497 Blast hits to 465 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2-View
AT3G50890homeobox protein 28 homeobox protein 28 (HB28); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 497 Blast hits to 471 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 497; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3+View
AT1G75240homeobox protein 33 (HB33); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox domain, ZF-HD class (InterPro:IPR006455), ZF-HD homeobox protein, Cys/His-rich dimerisation domain (InterPro:IPR006456), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 24 (TAIR:AT2G18350.1); Has 705 Blast hits to 675 proteins in 76 species: Archae - 0; Bacteria - 8; Metazoa - 117; Fungi - 10; Plants - 549; Viruses - 3; Other Eukaryotes - 18 (source: NCBI BLink). Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660). homeobox protein 331+View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00011G01660No description available.scaffold00011+View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR09G32620No description available.A09+View
BR09G09410No description available.A09-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G15700No description available.Bvchr6.sca002-View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G19730No description available.Chr1+View
CL08G14730No description available.Chr8-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G08650No description available.CM3.5_scaffold00007+View
CM00027G03360No description available.CM3.5_scaffold00027-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G20820No description available.scaffold_2+View
CRU_005G16150No description available.scaffold_5+View
CRU_003G31260No description available.scaffold_3-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G03650No description available.scaffold00006+View
CS00002G04340No description available.scaffold00002+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0006G12700No description available.scaffold_6+View
EG0009G20590No description available.scaffold_9-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV1G15460ZF-HD homeobox protein At4g24660 (AtHB-22) (similar to)LG1-View
FV2G50790ZF-HD homeobox protein At4g24660 (AtHB-22) (probable)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G07360No description available.Gm11+View
GM16G25280No description available.Gm16-View
GM01G37993No description available.Gm01-View
GM02G06270No description available.Gm02-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR03G01410No description available.Chr03-View
GR07G05050No description available.Chr07-View
GR09G20130No description available.Chr09-View
GR02G12750No description available.Chr02-View
GR07G20250No description available.Chr07-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G030870No description available.chr2-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD12G015750No description available.12-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06512G00140No description available.scaffold06512-View
ME02978G00140No description available.scaffold02978+View
ME07012G01190No description available.scaffold07012-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G020510homeobox domain C ZF-HD class proteinchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G50310ZF-HD protein dimerisation region containing protein, expressed5+View
OS02G47770ZF-HD protein dimerisation region containing protein, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G38640No description available.scaffold_1-View
PPE_007G17660No description available.scaffold_7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G22790No description available.Chr05+View
PT07G02410No description available.Chr07-View
PT05G12250No description available.Chr05-View
PT02G03520No description available.Chr02-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29634G00740No description available.29634-View
RC30170G04070No description available.30170+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G080490Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 *--- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch04-View
SL02G085160Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI)%3B contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionch02-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G028310Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 **-- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr02-View
ST04G033850Zinc finger-homeodomain protein 1 (Fragment) (AHRD V1 *--- B0LK17_YUCFI); contains Interpro domain(s) IPR006456 ZF-HD homeobox protein Cys/His-rich dimerisation regionchr04-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0008G02700No description available.scaffold_8+View
TC0001G03230No description available.scaffold_1-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G30400similar to AT1G75240|AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33)ch5-7+View
TP3G31750similar to AT2G18350|AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24)ch3-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09000name=GSVIVG01009721001;chr18+View
VV04G02080name=GSVIVG01018947001;chr4+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G38030No description available.5-View
ZM08G11300No description available.8+View


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Gene id
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Description
Chromosome
Strand