Anchorpoints

Gene id
CP00006G00490
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G02710No description available.scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G23096Encodes a prolyl 4-hydroxylase that modifies the extensin proteins in root hair cells. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G33910.1); Has 2414 Blast hits to 2405 proteins in 337 species: Archae - 0; Bacteria - 403; Metazoa - 956; Fungi - 77; Plants - 396; Viruses - 12; Other Eukaryotes - 570 (source: NCBI BLink).2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00144G00330No description available.scaffold00144-View

Beta vulgaris

Gene id Description Chromosome Strand Multiplicon
BV6G23200No description available.Bvchr6.sca001+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G17650No description available.Chr1+View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00007G06390No description available.CM3.5_scaffold00007+View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_004G02220No description available.scaffold_4-View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00006G01280No description available.scaffold00006-View
CS00084G00110No description available.scaffold00084+View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0009G05790No description available.scaffold_9+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G05040Prolyl 4-hydroxylase subunit alpha-1, Precursor (probable)LG2+View
FV1G24830Prolyl 4-hydroxylase subunit alpha-1 (probable)LG1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM11G05380No description available.Gm11-View
GM01G39900No description available.Gm01+View
GM05G22270No description available.Gm05-View
GM10G40520No description available.Gm10-View
GM17G17810No description available.Gm17-View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR07G22130No description available.Chr07+View
GR13G04930No description available.Chr13+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G036720No description available.chr5-View
LJ4G015540No description available.chr4-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD02G016170No description available.2+View
MD15G023210No description available.15+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10878G00280No description available.scaffold10878-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G095370prolyl 4-hydroxylase alpha-like proteinchr4+View
MT5G016090prolyl 4-hydroxylase subunit alpha-like proteinchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G55380oxidoreductase, putative, expressed3+View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_006G23320No description available.scaffold_6-View
PPE_008G15860No description available.scaffold_8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G05260No description available.Chr07+View
PT01G29680No description available.Chr01-View
PT09G09100No description available.Chr09-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28152G00210No description available.28152+View
RC29172G00090No description available.29172-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G092710Prolyl 4-hydroxylase alpha-2 subunit (AHRD V1 ***- B6TYA6_MAIZE)%3B contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase%2C alpha subunitch02+View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST02G031170Prolyl 4-hydroxylase alpha-2 subunit (AHRD V1 ***- B6TYA6_MAIZE); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunitchr02+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0001G06570No description available.scaffold_1+View
TC0002G10890No description available.scaffold_2+View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP4G02140similar to AT2G23096|oxidoreductase, 2OG-Fe(II) oxygenase family proteinch4-1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G00440name=GSVIVG01000153001;chr7-View
VV03G10150name=GSVIVG01037870001;chr3+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G53640prolyl 4-hydroxylase1+View


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Gene id
Species
Description
Chromosome
Strand