Anchorpoints

Gene id
CP00002G01820
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G16130No description available.scaffold_2+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G01735RING-finger protein for embryogenesis (RIE1); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G68070.1); Has 9688 Blast hits to 9662 proteins in 283 species: Archae - 0; Bacteria - 6; Metazoa - 2533; Fungi - 743; Plants - 5052; Viruses - 40; Other Eukaryotes - 1314 (source: NCBI BLink). RING-finger protein for embryogenesis encodes a RING-H2 zinc finger protein essential for seed development.2+View
AT1G68070Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-finger protein for embryogenesis (TAIR:AT2G01735.1); Has 10060 Blast hits to 10035 proteins in 290 species: Archae - 0; Bacteria - 6; Metazoa - 2675; Fungi - 773; Plants - 5064; Viruses - 53; Other Eukaryotes - 1489 (source: NCBI BLink). Zinc finger, C3HC4 type (RING finger) family protein1-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR_00060G00760No description available.scaffold00060-View

Brassica rapa

Gene id Description Chromosome Strand Multiplicon
BR06G35290No description available.A06+View

Citrullus lanatus

Gene id Description Chromosome Strand Multiplicon
CL01G06370No description available.Chr1-View

Cucumis melo

Gene id Description Chromosome Strand Multiplicon
CM00005G01970No description available.CM3.5_scaffold00005-View

Capsella rubella

Gene id Description Chromosome Strand Multiplicon
CRU_002G13680No description available.scaffold_2-View
CRU_005G00650No description available.scaffold_5+View

Citrus sinensis

Gene id Description Chromosome Strand Multiplicon
CS00058G00150No description available.scaffold00058-View

Eucalyptus grandis

Gene id Description Chromosome Strand Multiplicon
EG0007G15910No description available.scaffold_7+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G07800E3 ubiquitin-protein ligase At4g11680 (probable)scf0513158+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G05080No description available.Gm08+View
GM07G26470No description available.Gm07-View
GM02G09360No description available.Gm02+View

Gossypium raimondii

Gene id Description Chromosome Strand Multiplicon
GR02G17220No description available.Chr02+View
GR05G15700No description available.Chr05+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ4G050260No description available.chr4+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G001260No description available.13+View
MD10G000960No description available.10-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME08847G00200No description available.scaffold08847-View
ME10173G00920No description available.scaffold10173+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G032440zinc finger (C3HC4-type RING finger) family proteinchr1+View
MT8G105330zinc finger C C3HC4 type (RING finger) proteinchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G50290RING zinc finger protein, putative, expressed2-View

Prunus persica

Gene id Description Chromosome Strand Multiplicon
PPE_001G34210No description available.scaffold_1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT08G13490No description available.Chr08-View
PT10G10630No description available.Chr10+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G008020RING finger family protein (AHRD V1 ***- D6RU92_SILLA)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04-View

Solanum tuberosum

Gene id Description Chromosome Strand Multiplicon
ST04G007750E3 ubiquitin-protein ligase At4g11680 (AHRD V1 **-* RING4_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-typechr04+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC0002G29200No description available.scaffold_2-View

Thellungiella parvula

Gene id Description Chromosome Strand Multiplicon
TP5G23070similar to AT1G68070|zinc finger (C3HC4-type RING finger) family proteinch5-6-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G05860name=GSVIVG01011659001;chr1-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G39560LOC1002833845-View


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Gene id
Species
Description
Chromosome
Strand